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pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00089

Bact-Vir

pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00089

Identity

Kingdom:
phage

Quality

69.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 62.0 4.94e-01 90.9% 66.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 61.0 4.77e-01 89.1% 63.3%
1avyB00 1.20.5.320 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3 0.71 52.0 5.31e-01 87.3% 79.6%
3robA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 3.47e-01 89.1% 74.0%
2pvaA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.50 38.0 2.44e-01 87.3% 33.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3493963 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.85 60.0 4.73e-01 96.4% 40.0%
3413217 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.79 65.0 4.96e-01 87.3% 43.5%
3766746 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 51.0 3.41e-01 96.4% 19.0%
None — 0.69 55.0 3.19e-01 87.3% 11.8%
3516806 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.59 50.0 3.16e-01 92.7% 20.4%
5046185 2004.1.1.194 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 0.58 40.0 2.34e-01 81.8% 7.8%