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pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00150
Bact-Virpig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00150
Identity
- Kingdom:
- phage
Quality
68.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-76
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.64 | 50.0 | 3.92e-01 | 84.3% | 41.1% |
| 1914A00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.64 | 51.0 | 3.82e-01 | 87.1% | 89.5% |
| 1a2pA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.62 | 42.0 | 3.65e-01 | 70.0% | 75.0% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 52.0 | 4.00e-01 | 98.6% | 70.2% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 35.0 | 3.25e-01 | 88.6% | 44.0% |
| 3bb7A01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.61 | 42.0 | 3.14e-01 | 71.4% | 33.3% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.60 | 52.0 | 4.48e-01 | 100.0% | 61.0% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.60 | 53.0 | 4.39e-01 | 100.0% | 55.6% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 51.0 | 4.51e-01 | 100.0% | 65.4% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.59 | 42.0 | 4.21e-01 | 87.1% | 72.6% |
| 2g5fB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.59 | 44.0 | 2.71e-01 | 80.0% | 80.0% |
| 1pguA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 50.0 | 3.30e-01 | 98.6% | 75.6% |
| 2yt4A03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 39.0 | 3.51e-01 | 71.4% | 70.2% |
| 5hqgA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 50.0 | 3.30e-01 | 100.0% | 59.0% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.57 | 42.0 | 4.15e-01 | 80.0% | 89.6% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 47.0 | 3.03e-01 | 90.0% | 91.3% |
| 4fk5A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 47.0 | 3.05e-01 | 90.0% | 89.3% |
| 4nsxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 48.0 | 3.15e-01 | 98.6% | 59.8% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 48.0 | 3.22e-01 | 100.0% | 80.5% |
| 8adlB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 49.0 | 3.17e-01 | 98.6% | 49.4% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 47.0 | 3.05e-01 | 97.1% | 57.7% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 48.0 | 3.93e-01 | 100.0% | 86.9% |
| 6m90A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 47.0 | 3.18e-01 | 98.6% | 58.3% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.55 | 36.0 | 4.12e-01 | 92.9% | 97.9% |
| 2ovrB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 47.0 | 3.04e-01 | 98.6% | 61.4% |
| 1x5eA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 39.0 | 3.42e-01 | 77.1% | 92.7% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 44.0 | 2.91e-01 | 91.4% | 93.3% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 42.0 | 3.71e-01 | 88.6% | 83.6% |
| 1fgyA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 44.0 | 3.67e-01 | 92.9% | 88.9% |
| 4cswA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.53 | 39.0 | 2.96e-01 | 81.4% | 52.8% |
| 7jl1B01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.52 | 44.0 | 3.53e-01 | 97.1% | 94.0% |
| 2w18A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 2.96e-01 | 98.6% | 58.2% |
| 4pbpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.23e-01 | 98.6% | 91.3% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.76e-01 | 81.4% | 79.4% |
| 2mamA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 38.0 | 3.27e-01 | 82.9% | 94.1% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 40.0 | 3.32e-01 | 92.9% | 82.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003371 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.70 | 51.0 | 4.81e-01 | 77.1% | 85.9% |
| 3946165 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.67 | 48.0 | 5.24e-01 | 77.1% | 96.4% |
| 4964361 | 502.1.1.3 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › DUF7348 | 0.63 | 51.0 | 5.10e-01 | 92.9% | 88.6% |
| 5034874 | 210.1.2.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain | 0.63 | 55.0 | 3.74e-01 | 100.0% | 73.6% |
| 3731518 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 45.0 | 4.41e-01 | 91.4% | 72.0% |
| 3415741 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 46.0 | 3.69e-01 | 80.0% | 44.8% |
| 3741807 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.62 | 39.0 | 4.57e-01 | 75.7% | 97.8% |
| 4960280 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 50.0 | 4.56e-01 | 91.4% | 82.1% |
| 4029125 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.60 | 52.0 | 3.30e-01 | 95.7% | 44.5% |
| 3452325 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 50.0 | 3.57e-01 | 91.4% | 59.6% |
| 3915890 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.60 | 42.0 | 3.70e-01 | 75.7% | 83.6% |
| 4998833 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.59 | 48.0 | 3.88e-01 | 92.9% | 89.0% |
| 3741619 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.58 | 52.0 | 3.22e-01 | 100.0% | 77.4% |
| 3413860 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 47.0 | 2.97e-01 | 90.0% | 89.9% |
| 4026056 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.57 | 48.0 | 3.98e-01 | 92.9% | 72.0% |
| 3927439 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.57 | 47.0 | 3.56e-01 | 91.4% | 60.6% |
| 3494650 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 44.0 | 3.52e-01 | 82.9% | 65.7% |
| 3613182 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 47.0 | 2.92e-01 | 91.4% | 24.9% |
| 5048065 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.57 | 45.0 | 4.05e-01 | 85.7% | 62.0% |
| 4024247 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 47.0 | 2.97e-01 | 90.0% | 87.9% |
| 3608005 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 48.0 | 3.10e-01 | 92.9% | 89.9% |
| 3676439 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 47.0 | 2.94e-01 | 90.0% | 73.9% |
| 3539509 | 219.1.1.54 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C98 | 0.56 | 48.0 | 3.15e-01 | 91.4% | 90.0% |
| 5022991 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 41.0 | 3.83e-01 | 100.0% | 62.2% |
| 3552883 | 64.1.1.9 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 | 0.56 | 42.0 | 4.20e-01 | 90.0% | 77.3% |
| 3807424 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.56 | 46.0 | 2.96e-01 | 90.0% | 89.2% |
| 3787070 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.56 | 47.0 | 2.95e-01 | 98.6% | 53.3% |
| 3354048 | 220.1.1.163 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 | 0.56 | 47.0 | 4.23e-01 | 94.3% | 87.0% |
| 3750815 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.56 | 46.0 | 2.86e-01 | 90.0% | 84.7% |
| 3806989 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.55 | 48.0 | 3.23e-01 | 98.6% | 56.5% |
| 3823929 | 220.1.1.163 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 | 0.55 | 47.0 | 3.95e-01 | 94.3% | 75.0% |
| 4002544 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.55 | 47.0 | 2.84e-01 | 97.1% | 58.6% |
| 2539714 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.55 | 46.0 | 2.76e-01 | 94.3% | 26.2% |
| 3933159 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 46.0 | 3.08e-01 | 100.0% | 77.1% |
| 3248495 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 46.0 | 3.06e-01 | 98.6% | 66.2% |
| 3736996 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 46.0 | 3.03e-01 | 98.6% | 65.7% |
| 4014850 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 44.0 | 2.80e-01 | 95.7% | 53.5% |
| 3874175 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 43.0 | 3.62e-01 | 88.6% | 76.0% |
| 3173084 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.53 | 44.0 | 4.21e-01 | 98.6% | 77.6% |
| 3384946 | 5.1.10.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RCC1, RCC1_2 | 0.53 | 40.0 | 3.27e-01 | 81.4% | 69.6% |
| 3311685 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 44.0 | 3.13e-01 | 91.4% | 36.1% |
| 4026544 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 43.0 | 2.95e-01 | 98.6% | 57.0% |
| 3781064 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.52 | 41.0 | 4.16e-01 | 91.4% | 91.4% |
| 3669346 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.52 | 42.0 | 4.13e-01 | 100.0% | 82.3% |
| 4950203 | 331.4.1.35 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27341 | 0.52 | 43.0 | 3.09e-01 | 97.1% | 46.8% |
| 3709353 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.52 | 35.0 | 3.95e-01 | 75.7% | 100.0% |
| 3714009 | 64.1.1.14 ↗ | beta meanders › WW domain-like › WW domain › WW domain › PF30846 | 0.51 | 35.0 | 3.94e-01 | 72.9% | 100.0% |
| 4944335 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.51 | 39.0 | 3.70e-01 | 98.6% | 68.8% |
| 4544844 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.50 | 41.0 | 3.70e-01 | 94.3% | 76.2% |
| 3520790 | 3735.1.1.0 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein | 0.50 | 39.0 | 2.67e-01 | 92.9% | 38.6% |