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pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00153
Bact-Virpig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00153
Identity
- Kingdom:
- phage
Quality
82.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-198
Domain cluster:
rep: IMGVR_UViG_3300029775_000002-3300029775-Ga0134843_100044344__D173-355
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01385.26 best | OrfB_IS605 | 35.3 | 1.70e-08 | 77.2% | 83.3% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 35.0 | 4.89e-01 | 76.5% | 94.9% |
| 2fb6A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.59 | 30.0 | 3.40e-01 | 100.0% | 61.2% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.56 | 40.0 | 3.96e-01 | 74.5% | 68.3% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 33.0 | 3.76e-01 | 75.2% | 81.3% |
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 30.0 | 3.55e-01 | 100.0% | 81.4% |
| 3wuhA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 46.0 | 4.43e-01 | 95.3% | 98.2% |
| 3agkA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.51 | 40.0 | 4.31e-01 | 99.3% | 98.4% |
| 4y9jA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 37.0 | 3.71e-01 | 83.9% | 73.2% |
| 1k70A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 35.0 | 2.80e-01 | 99.3% | 33.9% |
| 4fwvA02 | 1.20.120.1680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.50 | 39.0 | 4.12e-01 | 98.0% | 91.8% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 26.0 | 3.36e-01 | 77.2% | 89.0% |
| 3gpgA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.50 | 41.0 | 4.01e-01 | 99.3% | 79.6% |
| 6uqyB01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.50 | 45.0 | 3.69e-01 | 98.7% | 99.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005094 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.95 | 85.0 | 7.56e-01 | 100.0% | 69.7% |
| 4941496 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.95 | 84.0 | 7.34e-01 | 100.0% | 65.9% |
| 4979486 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.95 | 72.0 | 6.78e-01 | 100.0% | 66.3% |
| 5017725 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.95 | 85.0 | 7.58e-01 | 100.0% | 70.3% |
| 4934057 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.95 | 72.0 | 7.24e-01 | 100.0% | 77.3% |
| 5051266 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.94 | 84.0 | 7.08e-01 | 100.0% | 60.9% |
| 4941600 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.93 | 70.0 | 6.82e-01 | 100.0% | 71.9% |
| 4999337 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.92 | 81.0 | 8.02e-01 | 100.0% | 87.7% |
| 4996586 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.91 | 81.0 | 8.42e-01 | 100.0% | 97.9% |
| 4998819 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.91 | 76.0 | 8.19e-01 | 100.0% | 99.2% |
| 3587862 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.91 | 86.0 | 7.61e-01 | 100.0% | 73.0% |
| 4999482 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.89 | 75.0 | 6.52e-01 | 100.0% | 61.4% |
| 4979574 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.88 | 64.0 | 6.11e-01 | 100.0% | 65.3% |
| 4972401 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.88 | 79.0 | 6.84e-01 | 100.0% | 64.7% |
| 4977429 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.87 | 76.0 | 7.92e-01 | 100.0% | 97.1% |
| 3956669 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.86 | 83.0 | 7.67e-01 | 100.0% | 82.8% |
| 3286637 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.86 | 75.0 | 7.20e-01 | 100.0% | 81.8% |
| 4173456 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.85 | 82.0 | 7.37e-01 | 100.0% | 76.4% |
| 3955489 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.85 | 81.0 | 7.08e-01 | 100.0% | 71.4% |
| 3587056 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 76.0 | 7.39e-01 | 100.0% | 87.5% |
| 5072432 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.84 | 72.0 | 6.60e-01 | 100.0% | 71.9% |
| 4007799 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.83 | 71.0 | 6.44e-01 | 100.0% | 69.5% |
| 4999765 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.82 | 68.0 | 6.54e-01 | 100.0% | 78.2% |
| 4999065 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.81 | 78.0 | 7.68e-01 | 100.0% | 98.1% |
| 4995140 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.79 | 71.0 | 7.25e-01 | 99.3% | 97.2% |
| 4978165 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.78 | 67.0 | 6.03e-01 | 99.3% | 67.5% |
| 4933539 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.77 | 72.0 | 6.29e-01 | 100.0% | 68.8% |
| 4961847 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.77 | 65.0 | 5.68e-01 | 100.0% | 61.9% |
| 5071248 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.77 | 72.0 | 6.40e-01 | 100.0% | 72.2% |
| 5064976 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.77 | 70.0 | 6.88e-01 | 100.0% | 90.0% |
| 5003640 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.77 | 66.0 | 5.93e-01 | 100.0% | 68.0% |
| 4933788 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.74 | 68.0 | 6.01e-01 | 100.0% | 69.0% |
| 4934194 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.74 | 65.0 | 5.87e-01 | 100.0% | 70.5% |
| 4971822 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 70.0 | 6.57e-01 | 100.0% | 85.1% |
| 4934281 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 64.0 | 6.53e-01 | 98.7% | 97.2% |
| 4991162 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.73 | 68.0 | 5.92e-01 | 100.0% | 72.6% |
| 4931546 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.72 | 61.0 | 5.69e-01 | 100.0% | 73.0% |
| 5011606 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.72 | 66.0 | 6.18e-01 | 100.0% | 81.4% |
| 4976214 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.72 | 66.0 | 5.95e-01 | 100.0% | 76.0% |
| 5055179 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.70 | 64.0 | 5.70e-01 | 100.0% | 70.5% |
| 5001282 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 63.0 | 6.42e-01 | 98.7% | 99.3% |
| 4997554 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.70 | 64.0 | 6.43e-01 | 100.0% | 98.7% |
| 5072202 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.67 | 51.0 | 4.66e-01 | 100.0% | 61.6% |
| 4972398 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 50.0 | 4.91e-01 | 100.0% | 72.5% |
| 2048184 | 2002.1.1.188 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_106 | 0.64 | 36.0 | 4.22e-01 | 100.0% | 77.1% |
| 4939764 | 2484.1.1.339 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › acVLRF1 | 0.63 | 43.0 | 4.63e-01 | 98.7% | 80.0% |
| 4997731 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 45.0 | 4.35e-01 | 100.0% | 67.1% |
| 3523907 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.61 | 36.0 | 3.93e-01 | 82.6% | 69.6% |
| 4251513 | 2008.1.1.156 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29906 | 0.57 | 33.0 | 3.24e-01 | 100.0% | 49.4% |
| 1828364 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.56 | 44.0 | 4.15e-01 | 82.6% | 74.7% |
| 4986231 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.56 | 33.0 | 3.38e-01 | 98.7% | 57.7% |
| 4024356 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 38.0 | 3.78e-01 | 73.8% | 78.8% |
| 4959083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 36.0 | 3.51e-01 | 73.8% | 94.1% |