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pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00159

Bact-Vir

pig_ID_2419_F67_scaffold_44_curated_prodigal-single.1__X__X__00159

Identity

Kingdom:
phage

Quality

45.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 183-312
PDB
D2 medium residues 313-402
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rwrA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 76.0 5.18e-01 100.0% 51.2%
4i84A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 76.0 5.20e-01 100.0% 54.1%
4oj5C04 2.160.20.130 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.81 73.0 5.66e-01 97.8% 65.9%
4kh3A00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.78 71.0 4.37e-01 100.0% 20.9%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.75 63.0 6.19e-01 91.1% 93.8%
3ljyA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.73 65.0 4.81e-01 100.0% 71.5%
3jx8A00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.73 65.0 4.75e-01 100.0% 43.3%
4u7lA01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.72 64.0 4.40e-01 100.0% 37.6%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.72 64.0 5.34e-01 100.0% 75.3%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.71 64.0 5.31e-01 100.0% 66.2%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.71 64.0 5.34e-01 100.0% 72.6%
3petA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.68 60.0 4.59e-01 100.0% 77.5%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 60.0 5.67e-01 100.0% 91.5%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 60.0 5.37e-01 100.0% 80.3%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026564 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.96 93.0 6.89e-01 100.0% 47.2%
4497421 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.96 91.0 9.18e-01 98.9% 100.0%
4929387 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.95 72.0 8.22e-01 80.0% 100.0%
4028157 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.95 91.0 7.73e-01 100.0% 72.6%
4020264 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.95 90.0 8.49e-01 100.0% 87.6%
3800711 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.93 88.0 7.23e-01 100.0% 61.3%
3722181 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.91 85.0 8.03e-01 100.0% 87.6%
4025775 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.90 84.0 7.67e-01 100.0% 79.1%
5040588 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.89 83.0 7.32e-01 100.0% 72.8%
3798319 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.88 81.0 6.93e-01 100.0% 65.7%
5005047 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.88 82.0 6.95e-01 100.0% 64.3%
4951076 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.87 81.0 6.94e-01 100.0% 65.9%
3517885 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.87 81.0 6.32e-01 100.0% 53.9%
5020282 208.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.87 81.0 8.01e-01 100.0% 94.7%
4935712 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.87 81.0 6.81e-01 100.0% 62.8%
5006685 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.85 78.0 6.66e-01 100.0% 63.6%
5041137 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.85 64.0 7.14e-01 77.8% 100.0%
3483229 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.85 79.0 4.85e-01 100.0% 45.7%
4981608 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.85 78.0 6.16e-01 100.0% 51.4%
4957202 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.84 78.0 6.45e-01 100.0% 60.7%
5020283 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.83 74.0 6.60e-01 96.7% 69.6%
5002393 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.83 77.0 6.91e-01 100.0% 75.0%
5032703 207.14.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.83 76.0 6.97e-01 100.0% 79.1%
4965634 207.14.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.83 76.0 6.67e-01 100.0% 70.0%
3596944 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.82 67.0 5.53e-01 100.0% 50.3%
4932011 207.14.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.82 74.0 6.84e-01 100.0% 77.4%
5007613 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.81 75.0 6.62e-01 100.0% 80.5%
3963707 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.80 65.0 6.82e-01 94.4% 97.5%
5033306 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.80 72.0 6.12e-01 97.8% 63.0%
2132861 207.10.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Arctic yeast antifreeze protein › Arctic yeast antifreeze protein › Ice_binding 0.79 72.0 5.35e-01 100.0% 51.6%
5039608 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.78 58.0 6.40e-01 77.8% 100.0%
3246091 389.1.1.157 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Epiglycanin_TR 0.74 65.0 5.14e-01 95.6% 92.8%
1285094 207.2.1.18 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DUF2807 0.74 66.0 4.87e-01 100.0% 49.8%
4406918 207.6.1.16 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP 0.71 63.0 5.63e-01 100.0% 70.8%
3758283 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.70 64.0 5.10e-01 100.0% 67.4%
3236384 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.69 58.0 4.47e-01 92.2% 87.0%
4968617 208.7.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein 0.68 50.0 4.83e-01 97.8% 69.0%
4419821 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.68 62.0 5.74e-01 100.0% 87.8%
3838430 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.67 62.0 5.85e-01 100.0% 87.6%
4459287 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.66 59.0 5.63e-01 97.8% 89.5%
4472803 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.66 60.0 5.78e-01 100.0% 98.0%
1489336 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.66 60.0 5.44e-01 100.0% 83.1%
4475590 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.65 58.0 5.55e-01 100.0% 96.2%
3187916 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.63 55.0 4.23e-01 100.0% 53.2%
4030641 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.61 55.0 4.49e-01 100.0% 95.8%
D3 medium residues 403-496
PDB
D4 medium residues 497-510_526-613
PDB
D5 medium residues 1027-1081
PDB