←Back to structures
pig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00044
Bact-Virpig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00044
Identity
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-79
Domain cluster:
rep: IMGVR_UViG_3300000167_000440-3300000167-SI39nov09_120mDRAFT_10028938__D21-70
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13518.13 best | HTH_28 | 28.2 | 2.10e-06 | 60.0% | 61.5% |
| PF13384.13 | HTH_23 | 31.7 | 1.40e-07 | 57.1% | 58.0% |
| PF13613.13 | HTH_Tnp_4 | 29.2 | 7.90e-07 | 48.6% | 54.7% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.58e-01 | 84.3% | 46.8% |
| 1br2A03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.57 | 42.0 | 3.79e-01 | 78.6% | 75.8% |
| 2ao9I01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 42.0 | 3.95e-01 | 90.0% | 78.2% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.75e-01 | 85.7% | 100.0% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.51 | 38.0 | 3.21e-01 | 84.3% | 94.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5053441 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.80 | 51.0 | 5.49e-01 | 70.0% | 76.7% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 46.0 | 4.88e-01 | 70.0% | 76.7% |
| 4945932 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 51.0 | 4.57e-01 | 75.7% | 55.8% |
| 4008641 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.61 | 53.0 | 5.03e-01 | 100.0% | 87.1% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.55 | 50.0 | 4.52e-01 | 100.0% | 81.1% |