←Back to structures
pig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00079
Bact-Virpig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00079
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-45_103-226
Domain cluster:
rep: OR475272.1__WNM67070.1__SEA_SCHOMBER_49__00049__D1-43_60-156
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kp0A03 | 3.30.30.60 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain | 0.64 | 29.0 | 4.17e-01 | 77.4% | 95.5% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 27.0 | 3.62e-01 | 78.7% | 72.8% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.64 | 29.0 | 4.28e-01 | 77.4% | 98.5% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 42.0 | 4.63e-01 | 100.0% | 83.1% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 28.0 | 3.58e-01 | 72.9% | 68.9% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.61 | 28.0 | 3.94e-01 | 74.8% | 97.0% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 34.0 | 4.07e-01 | 78.1% | 80.6% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 34.0 | 3.87e-01 | 78.1% | 75.0% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 29.0 | 3.48e-01 | 72.9% | 70.9% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.56 | 31.0 | 3.66e-01 | 86.5% | 76.4% |
| 3ayhB01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.56 | 30.0 | 4.01e-01 | 74.2% | 100.0% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 29.0 | 3.25e-01 | 97.4% | 62.2% |
| 3tx8A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 33.0 | 3.79e-01 | 78.7% | 80.7% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 4.26e-01 | 98.1% | 85.3% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.53 | 47.0 | 4.00e-01 | 97.4% | 61.2% |
| 3pfeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.88e-01 | 79.4% | 81.5% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 25.0 | 3.18e-01 | 82.6% | 75.3% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 23.0 | 3.08e-01 | 83.9% | 78.8% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.51 | 31.0 | 3.88e-01 | 89.7% | 100.0% |
| 4dzdA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.50 | 31.0 | 3.50e-01 | 80.0% | 78.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995818 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.90 | 69.0 | 7.69e-01 | 100.0% | 96.0% |
| 3944239 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.72 | 48.0 | 5.71e-01 | 92.3% | 100.0% |
| 4614530 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.64 | 34.0 | 3.83e-01 | 79.4% | 65.8% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.63 | 52.0 | 5.53e-01 | 98.7% | 97.8% |
| 4127225 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.63 | 34.0 | 3.85e-01 | 79.4% | 68.7% |
| 4541115 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.62 | 32.0 | 3.51e-01 | 79.4% | 60.0% |
| 3233980 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 28.0 | 3.57e-01 | 81.3% | 73.3% |
| 5082575 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.60 | 31.0 | 4.14e-01 | 78.7% | 95.0% |
| 3802659 | 304.8.1.66 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 | 0.59 | 35.0 | 4.16e-01 | 99.4% | 85.7% |
| 3612888 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.56 | 32.0 | 3.52e-01 | 80.6% | 69.2% |
| 5052888 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 37.0 | 4.07e-01 | 92.9% | 83.2% |
| 5029814 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.56 | 25.0 | 3.75e-01 | 87.7% | 100.0% |
| 3795203 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 34.0 | 2.82e-01 | 99.4% | 33.7% |
| 4169524 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.55 | 31.0 | 3.52e-01 | 83.2% | 73.0% |
| 4993109 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.53 | 29.0 | 3.85e-01 | 90.3% | 96.5% |
| 4498351 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.53 | 34.0 | 3.78e-01 | 80.0% | 80.8% |
| 4092213 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.53 | 32.0 | 3.68e-01 | 79.4% | 80.9% |
| 2074267 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.52 | 48.0 | 4.80e-01 | 100.0% | 96.2% |
| 4001541 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 30.0 | 3.29e-01 | 97.4% | 68.0% |
D2
high
residues 230-293
D3
medium
residues 51-99