←Back to structures
pig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00099
Bact-Virpig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00099
Identity
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 56-176
Domain cluster:
rep: ON755184.1__UVF61518.1__SEA_DALANDE_105__00105__D152-256
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z85A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.74 | 42.0 | 5.45e-01 | 95.0% | 100.0% |
| 2egvA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.72 | 40.0 | 5.23e-01 | 94.2% | 100.0% |
| 1vhkA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.68 | 41.0 | 5.11e-01 | 93.4% | 100.0% |
| 1nxzA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.67 | 40.0 | 4.96e-01 | 95.9% | 98.6% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.66 | 38.0 | 4.68e-01 | 81.8% | 90.7% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 32.0 | 3.62e-01 | 87.6% | 63.3% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.58 | 37.0 | 4.25e-01 | 89.3% | 87.6% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.54 | 40.0 | 4.30e-01 | 77.7% | 98.1% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 37.0 | 4.01e-01 | 90.1% | 85.0% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.52 | 32.0 | 3.75e-01 | 96.7% | 92.5% |
| 4hntA04 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.51 | 36.0 | 3.88e-01 | 99.2% | 86.1% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 38.0 | 4.74e-01 | 92.6% | 85.3% |
| 4537516 | 1.1.9.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_4 | 0.69 | 42.0 | 5.16e-01 | 94.2% | 97.3% |
| 4943366 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 38.0 | 4.40e-01 | 92.6% | 78.8% |
| 5076995 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.65 | 37.0 | 4.46e-01 | 91.7% | 85.0% |
| 3389763 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.60 | 37.0 | 4.17e-01 | 93.4% | 78.9% |
| 3708890 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.57 | 40.0 | 4.21e-01 | 91.7% | 81.9% |
| 4333010 | 1.1.7.70 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II | 0.56 | 34.0 | 4.10e-01 | 88.4% | 96.0% |
| 3613165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 39.0 | 4.16e-01 | 91.7% | 81.9% |
| 4161622 | 1.1.7.70 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II | 0.56 | 32.0 | 3.90e-01 | 84.3% | 90.7% |
| 3893654 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.55 | 39.0 | 3.99e-01 | 95.0% | 75.7% |
| 4999516 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.54 | 42.0 | 4.08e-01 | 81.8% | 97.0% |
| 3742942 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 37.0 | 3.99e-01 | 89.3% | 85.0% |
| 2642985 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.53 | 34.0 | 3.89e-01 | 91.7% | 89.5% |
| 3572941 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 38.0 | 4.09e-01 | 95.0% | 88.6% |
| 4000316 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.51 | 38.0 | 4.10e-01 | 94.2% | 95.0% |
| 4199524 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.51 | 42.0 | 3.48e-01 | 92.6% | 56.2% |
| None | — | 0.51 | 42.0 | 3.40e-01 | 90.9% | 53.9% | |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.51 | 38.0 | 3.82e-01 | 77.7% | 78.3% |
| 3234172 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.50 | 36.0 | 4.00e-01 | 76.9% | 98.9% |