←Back to structures
pig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00178
Bact-Virpig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00178
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-146
Domain cluster:
rep: KY464836.1__AQT27804.1__X__00042__D6-155
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00156.34 best | Pribosyltran | 31.0 | 2.00e-07 | 94.4% | 76.6% |
D2
high
residues 219-367
Domain cluster:
rep: NC_074643__YP_010772404.1__QIT40-gp03__00003__D149-351
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13604.13 best | AAA_30 | 52.5 | 7.30e-14 | 98.7% | 70.7% |
| PF05970.21 | PIF1 | 34.5 | 2.20e-08 | 96.6% | 68.6% |
| PF13245.13 | AAA_19 | 39.1 | 1.20e-09 | 86.6% | 93.3% |
| PF01443.25 | Viral_helicase1 | 27.2 | 4.60e-06 | 80.5% | 42.1% |
| PF13401.13 | AAA_22 | 28.3 | 2.70e-06 | 76.5% | 90.0% |
D3
medium
residues 379-425_553-617
Domain cluster:
rep: helicase_2__YP_010087709__Homarus_gammarus_nudivirus__2509616__D258-315_421-469
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01443.25 best | Viral_helicase1 | 24.5 | 3.10e-05 | 75.0% | 20.6% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w36D03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 70.0 | 5.96e-01 | 93.8% | 98.3% |
| 3upuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 64.0 | 6.05e-01 | 84.8% | 96.2% |
| 3e1sA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 69.0 | 6.30e-01 | 95.5% | 94.3% |
| 1pjrA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 63.0 | 5.10e-01 | 91.1% | 89.0% |
| 2pl3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 52.0 | 4.04e-01 | 73.2% | 66.8% |
| 1fuuB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 51.0 | 4.11e-01 | 73.2% | 70.0% |
| 5gvrA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 50.0 | 3.93e-01 | 72.3% | 71.4% |
| 1vecA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 51.0 | 4.12e-01 | 73.2% | 74.8% |
| 3berA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 51.0 | 4.04e-01 | 73.2% | 70.0% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 61.0 | 5.48e-01 | 91.1% | 90.6% |
| 3dmnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 60.0 | 5.24e-01 | 91.1% | 87.0% |
| 4b3fX03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 60.0 | 4.86e-01 | 92.0% | 84.2% |
| 2xzlA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 60.0 | 4.77e-01 | 92.0% | 83.5% |
| 3b85A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 50.0 | 4.15e-01 | 74.1% | 72.7% |
| 6jimB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 59.0 | 5.56e-01 | 91.1% | 88.0% |
| 3u4qA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 58.0 | 4.37e-01 | 91.1% | 86.0% |
| 3vkwA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 57.0 | 5.15e-01 | 91.1% | 84.5% |
| 8ebtA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 46.0 | 3.90e-01 | 74.1% | 82.1% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 52.0 | 4.59e-01 | 86.6% | 89.3% |
| 3jb9X01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 54.0 | 4.28e-01 | 93.8% | 75.1% |
| 1y8cA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 43.0 | 3.66e-01 | 70.5% | 71.5% |
| 3ou2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 43.0 | 3.55e-01 | 71.4% | 71.1% |
| 4hh4C01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 43.0 | 3.60e-01 | 71.4% | 67.3% |
| 4do7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 42.0 | 3.12e-01 | 73.2% | 78.5% |
| 1i9gA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 41.0 | 3.51e-01 | 71.4% | 71.7% |
| 1hyhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 39.0 | 3.63e-01 | 70.5% | 79.4% |
| 7wm5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 3.36e-01 | 79.5% | 61.8% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 2.91e-01 | 83.0% | 51.6% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3385675 | 2004.1.1.298 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase | 0.90 | 87.0 | 7.83e-01 | 100.0% | 89.0% |
| 3610095 | 2004.1.1.298 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase | 0.90 | 87.0 | 7.34e-01 | 100.0% | 84.7% |
| 3716782 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 87.0 | 8.14e-01 | 100.0% | 87.7% |
| 3600234 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 86.0 | 7.28e-01 | 100.0% | 88.2% |
| 3890170 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.89 | 85.0 | 7.79e-01 | 100.0% | 85.7% |
| 3363137 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 85.0 | 7.87e-01 | 100.0% | 86.7% |
| 3591776 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.87 | 84.0 | 7.34e-01 | 100.0% | 90.3% |
| 3891480 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.87 | 84.0 | 5.64e-01 | 100.0% | 33.5% |
| 3605939 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.87 | 84.0 | 7.76e-01 | 100.0% | 90.4% |
| 3882209 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.86 | 83.0 | 7.68e-01 | 100.0% | 84.4% |
| 3789466 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.86 | 83.0 | 7.24e-01 | 100.0% | 74.8% |
| 3777141 | 2004.1.1.298 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase | 0.86 | 83.0 | 7.41e-01 | 100.0% | 78.6% |
| 3601738 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.85 | 79.0 | 7.59e-01 | 100.0% | 87.2% |
| 3267758 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.85 | 81.0 | 7.53e-01 | 100.0% | 88.1% |
| 3926523 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.85 | 79.0 | 6.83e-01 | 99.1% | 95.2% |
| 3682236 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.83 | 76.0 | 6.49e-01 | 96.4% | 96.5% |
| 3648251 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.83 | 76.0 | 5.93e-01 | 96.4% | 95.5% |
| 3596401 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.83 | 79.0 | 7.32e-01 | 100.0% | 85.2% |
| 3719002 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.82 | 79.0 | 7.32e-01 | 100.0% | 85.2% |
| 3671414 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 72.0 | 6.01e-01 | 92.0% | 96.7% |
| 3372759 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.82 | 75.0 | 5.49e-01 | 96.4% | 53.7% |
| 4610954 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 72.0 | 7.17e-01 | 93.8% | 90.4% |
| 4518186 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.81 | 73.0 | 6.24e-01 | 95.5% | 98.2% |
| 3970065 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 72.0 | 6.20e-01 | 93.8% | 96.4% |
| 3370015 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 77.0 | 6.41e-01 | 100.0% | 84.8% |
| 3807611 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 76.0 | 6.74e-01 | 100.0% | 96.1% |
| 3662519 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.81 | 65.0 | 6.94e-01 | 98.2% | 94.0% |
| 3242523 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 74.0 | 6.98e-01 | 96.4% | 96.9% |
| 3372829 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 69.0 | 6.20e-01 | 89.3% | 97.2% |
| 3658525 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.80 | 69.0 | 6.29e-01 | 89.3% | 92.9% |
| None | — | 0.79 | 68.0 | 6.22e-01 | 92.0% | 97.2% | |
| 3958144 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 73.0 | 6.24e-01 | 99.1% | 97.1% |
| 3590487 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.78 | 68.0 | 6.20e-01 | 92.9% | 97.9% |
| 3603695 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.77 | 67.0 | 5.56e-01 | 92.9% | 95.1% |
| 4429341 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.76 | 70.0 | 5.87e-01 | 98.2% | 95.0% |
| 3959798 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 52.0 | 4.20e-01 | 73.2% | 74.3% |
| 3185870 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.73 | 54.0 | 4.31e-01 | 76.8% | 74.3% |
| 3483470 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 50.0 | 3.85e-01 | 73.2% | 62.4% |
| 3210977 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.71 | 61.0 | 4.90e-01 | 92.0% | 80.0% |
| None | — | 0.70 | 62.0 | 4.60e-01 | 93.8% | 54.8% | |
| 3991573 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.70 | 49.0 | 3.93e-01 | 72.3% | 68.0% |
| 2095415 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 60.0 | 5.30e-01 | 91.1% | 84.4% |
| 5005831 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 60.0 | 4.98e-01 | 91.1% | 87.9% |
| 4587002 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.70 | 50.0 | 4.06e-01 | 73.2% | 74.6% |
| 3199673 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 60.0 | 4.57e-01 | 92.0% | 77.2% |
| 3237175 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.70 | 49.0 | 3.85e-01 | 72.3% | 70.9% |
| 3525324 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 60.0 | 4.69e-01 | 92.0% | 73.8% |
| 3916856 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.69 | 49.0 | 3.70e-01 | 72.3% | 62.3% |
| 4943903 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 60.0 | 3.57e-01 | 92.0% | 25.7% |
| 4106913 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.69 | 48.0 | 4.03e-01 | 72.3% | 79.5% |
| 3959799 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 50.0 | 3.91e-01 | 75.0% | 66.5% |
| 3688101 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 60.0 | 4.73e-01 | 92.9% | 85.5% |
| 5023408 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.69 | 50.0 | 4.02e-01 | 75.0% | 73.8% |
| 4153441 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.69 | 48.0 | 3.69e-01 | 72.3% | 68.6% |
| 4995898 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 58.0 | 4.50e-01 | 92.0% | 81.7% |
| 4029838 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 59.0 | 3.55e-01 | 92.9% | 24.9% |
| 3926025 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.67 | 58.0 | 4.99e-01 | 92.0% | 89.4% |
| 3944062 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.65 | 48.0 | 3.68e-01 | 76.8% | 62.8% |
| 3516939 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.63 | 54.0 | 3.48e-01 | 92.0% | 72.4% |
| 3999609 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.63 | 44.0 | 3.32e-01 | 73.2% | 70.7% |
| 5047993 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.62 | 43.0 | 3.31e-01 | 71.4% | 67.2% |
| 3717389 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.61 | 52.0 | 3.38e-01 | 92.0% | 73.1% |
| 3318716 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 46.0 | 3.40e-01 | 81.2% | 81.0% |
| 4363708 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.59 | 51.0 | 3.33e-01 | 93.8% | 90.9% |
| 3208633 | 2004.1.1.768 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_12, AAA_19 | 0.59 | 51.0 | 3.11e-01 | 97.3% | 59.1% |
| 3980599 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.58 | 49.0 | 3.81e-01 | 92.0% | 82.0% |
| 3954334 | 2002.1.1.53 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N | 0.55 | 38.0 | 3.36e-01 | 70.5% | 84.2% |
D4
medium
residues 426-552
Domain cluster:
rep: helicase-2__YP_003429432__Artogeia_rapae_granulovirus__362830__D268-377
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 36.0 | 5.44e-01 | 85.0% | 98.2% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 44.0 | 5.80e-01 | 92.1% | 100.0% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 37.0 | 5.03e-01 | 89.0% | 83.1% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.79 | 30.0 | 5.05e-01 | 92.1% | 100.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 36.0 | 5.03e-01 | 92.9% | 92.2% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 35.0 | 5.10e-01 | 87.4% | 96.6% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 33.0 | 4.88e-01 | 85.0% | 100.0% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 42.0 | 5.42e-01 | 83.5% | 94.8% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 37.0 | 4.64e-01 | 90.6% | 78.5% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 36.0 | 4.86e-01 | 82.7% | 91.3% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.71 | 34.0 | 4.88e-01 | 85.8% | 98.3% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.69 | 37.0 | 5.02e-01 | 84.3% | 100.0% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 36.0 | 4.95e-01 | 96.1% | 98.5% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.65 | 35.0 | 3.95e-01 | 97.6% | 67.3% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.65 | 38.0 | 4.36e-01 | 70.9% | 77.9% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 33.0 | 3.79e-01 | 86.6% | 85.4% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4098445 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.90 | 37.0 | 5.58e-01 | 84.3% | 86.7% |
| 3486327 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.90 | 37.0 | 5.57e-01 | 84.3% | 86.7% |
| 4101587 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.89 | 71.0 | 7.84e-01 | 92.1% | 100.0% |
| 4660107 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.89 | 36.0 | 5.41e-01 | 85.8% | 85.0% |
| 1746358 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 70.0 | 7.61e-01 | 94.5% | 100.0% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.85 | 37.0 | 5.10e-01 | 86.6% | 78.6% |
| 3302391 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.85 | 60.0 | 5.75e-01 | 100.0% | 65.0% |
| 3510526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 37.0 | 5.73e-01 | 85.0% | 100.0% |
| 3740753 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.84 | 38.0 | 5.32e-01 | 80.3% | 86.2% |
| 3385654 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 73.0 | 7.56e-01 | 91.3% | 100.0% |
| 3486328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 37.0 | 5.44e-01 | 87.4% | 91.7% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 36.0 | 5.55e-01 | 85.0% | 98.2% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.82 | 37.0 | 4.80e-01 | 88.2% | 73.3% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.81 | 37.0 | 4.99e-01 | 88.2% | 80.0% |
| 3931905 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 42.0 | 4.43e-01 | 70.1% | 56.5% |
| 3022070 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.81 | 70.0 | 7.38e-01 | 94.5% | 100.0% |
| 3710007 | 4.1.1.372 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30207 | 0.80 | 65.0 | 6.69e-01 | 85.0% | 100.0% |
| 3177112 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.80 | 72.0 | 5.81e-01 | 95.3% | 100.0% |
| 3786183 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.79 | 70.0 | 6.79e-01 | 92.9% | 100.0% |
| 2726885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 67.0 | 7.12e-01 | 94.5% | 100.0% |
| 4347063 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.79 | 71.0 | 6.98e-01 | 95.3% | 100.0% |
| 3816455 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.77 | 69.0 | 7.02e-01 | 94.5% | 100.0% |
| 3668420 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.77 | 73.0 | 6.24e-01 | 100.0% | 67.9% |
| 4367301 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 34.0 | 5.11e-01 | 89.8% | 98.2% |
| 3172952 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 68.0 | 5.95e-01 | 92.9% | 100.0% |
| 3671986 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.77 | 39.0 | 5.24e-01 | 74.8% | 90.0% |
| 4284118 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 45.0 | 5.79e-01 | 90.6% | 100.0% |
| 3669214 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.76 | 71.0 | 7.11e-01 | 99.2% | 98.5% |
| 3357239 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.76 | 67.0 | 6.17e-01 | 92.9% | 79.7% |
| 3517651 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 45.0 | 5.70e-01 | 92.1% | 100.0% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.76 | 37.0 | 5.30e-01 | 85.8% | 100.0% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.75 | 37.0 | 5.22e-01 | 98.4% | 95.4% |
| 3492757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 40.0 | 5.41e-01 | 85.8% | 97.1% |
| 2725406 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 37.0 | 4.66e-01 | 89.8% | 76.8% |
| 158943 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 36.0 | 4.55e-01 | 89.8% | 75.9% |
| 3598285 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 41.0 | 5.52e-01 | 88.2% | 100.0% |
| 3597575 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 67.0 | 6.32e-01 | 95.3% | 100.0% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.74 | 41.0 | 4.46e-01 | 100.0% | 65.1% |
| 3425872 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.73 | 50.0 | 5.92e-01 | 70.1% | 100.0% |
| 4098870 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.73 | 38.0 | 4.44e-01 | 97.6% | 69.5% |
| 3479037 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 37.0 | 4.66e-01 | 88.2% | 80.0% |
| 3592525 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 52.0 | 5.55e-01 | 73.2% | 91.8% |
| 3363448 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.72 | 47.0 | 5.68e-01 | 87.4% | 98.8% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 36.0 | 5.03e-01 | 85.0% | 100.0% |
| 3221094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 60.0 | 6.27e-01 | 91.3% | 100.0% |
| 490 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 38.0 | 4.91e-01 | 97.6% | 93.2% |
| None | — | 0.68 | 55.0 | 3.76e-01 | 100.0% | 26.5% | |
| 4210485 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.68 | 34.0 | 4.62e-01 | 85.8% | 93.8% |
| 3278853 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 35.0 | 4.86e-01 | 90.6% | 100.0% |
| 3927795 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 33.0 | 4.67e-01 | 85.8% | 100.0% |
| 3511277 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 42.0 | 5.05e-01 | 85.0% | 100.0% |
| 4117297 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 36.0 | 4.75e-01 | 89.8% | 100.0% |
| 3974170 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 38.0 | 4.23e-01 | 94.5% | 80.0% |
| 3268160 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 36.0 | 4.26e-01 | 99.2% | 91.1% |
| 4200330 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.56 | 42.0 | 4.31e-01 | 97.6% | 79.2% |
| 3651964 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.56 | 42.0 | 4.31e-01 | 85.0% | 81.7% |
| 3366578 | 4.1.1.325 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 | 0.55 | 41.0 | 4.28e-01 | 85.0% | 81.7% |
| 4987744 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.53 | 36.0 | 3.57e-01 | 100.0% | 65.9% |