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pig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00221
Bact-Virpig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00221
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-106
Domain cluster:
rep: SRR1747065_scaffold_10_prodigal-single.1__X__X__00218__D6-112
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02661.24 best | Fic | 33.9 | 6.70e-08 | 57.0% | 51.6% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dd7C00 | 1.20.120.1870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain | 0.85 | 79.0 | 7.33e-01 | 100.0% | 91.0% |
| 4u04A02 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.81 | 75.0 | 5.64e-01 | 100.0% | 57.6% |
| 3cucA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.81 | 75.0 | 5.42e-01 | 100.0% | 56.9% |
| 3shgA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.79 | 72.0 | 5.72e-01 | 100.0% | 67.2% |
| 3f1bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 48.0 | 4.00e-01 | 86.0% | 65.0% |
| 2dlaA01 | 1.20.930.50 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.61 | 42.0 | 3.61e-01 | 71.0% | 63.1% |
| 2ckwA04 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.60 | 43.0 | 4.23e-01 | 75.0% | 79.4% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.59 | 41.0 | 4.31e-01 | 71.0% | 87.2% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.59 | 39.0 | 4.22e-01 | 70.0% | 84.0% |
| 2rekA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 45.0 | 3.83e-01 | 84.0% | 66.3% |
| 2genA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 46.0 | 3.82e-01 | 89.0% | 72.9% |
| 2ibdA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 44.0 | 3.93e-01 | 84.0% | 87.8% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 43.0 | 4.22e-01 | 93.0% | 74.3% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.56 | 41.0 | 4.07e-01 | 79.0% | 99.1% |
| 5my3A00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.56 | 39.0 | 3.20e-01 | 74.0% | 79.6% |
| 1grlB01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.55 | 47.0 | 3.63e-01 | 98.0% | 47.5% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.55 | 39.0 | 4.02e-01 | 74.0% | 80.9% |
| 1ysyA00 | 1.10.8.370 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › nsp7 replicase | 0.54 | 38.0 | 4.11e-01 | 100.0% | 87.1% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 45.0 | 4.08e-01 | 93.0% | 92.4% |
| 3qkxB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 43.0 | 3.61e-01 | 89.0% | 70.2% |
| 3kevA02 | 1.10.238.200 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Cullin, PONY binding domain | 0.52 | 35.0 | 3.62e-01 | 70.0% | 72.6% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 41.0 | 4.04e-01 | 94.0% | 80.4% |
| 2cwqA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.51 | 42.0 | 3.91e-01 | 90.0% | 85.7% |
| 2ee7A01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.51 | 35.0 | 3.43e-01 | 77.0% | 61.7% |
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 36.0 | 3.64e-01 | 86.0% | 73.3% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5049550 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.89 | 84.0 | 7.74e-01 | 100.0% | 91.2% |
| 3588861 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.89 | 83.0 | 7.42e-01 | 100.0% | 88.9% |
| 4966457 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 82.0 | 7.89e-01 | 100.0% | 92.0% |
| 5021433 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 83.0 | 7.59e-01 | 100.0% | 92.8% |
| 5004520 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 83.0 | 7.84e-01 | 100.0% | 93.9% |
| 5005301 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 83.0 | 7.84e-01 | 100.0% | 94.8% |
| 3291594 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 82.0 | 7.41e-01 | 100.0% | 89.2% |
| 4937383 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 80.0 | 7.38e-01 | 100.0% | 93.6% |
| 4962046 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 79.0 | 7.26e-01 | 100.0% | 92.8% |
| 4937329 | 4040.1.1.0 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like | 0.84 | 78.0 | 6.30e-01 | 100.0% | 86.6% |
| 4993696 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 76.0 | 5.63e-01 | 100.0% | 55.4% |
| 3965496 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 75.0 | 5.74e-01 | 100.0% | 59.5% |
| 5032503 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 76.0 | 5.54e-01 | 100.0% | 53.2% |
| 4980541 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 75.0 | 5.45e-01 | 100.0% | 51.9% |
| 5030057 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 75.0 | 5.50e-01 | 100.0% | 55.2% |
| 5027622 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 75.0 | 5.53e-01 | 100.0% | 54.7% |
| 3963324 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 75.0 | 5.42e-01 | 100.0% | 51.2% |
| 3931514 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 75.0 | 5.46e-01 | 100.0% | 51.8% |
| 4643006 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 75.0 | 5.30e-01 | 100.0% | 46.3% |
| 4980558 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 74.0 | 6.33e-01 | 100.0% | 94.8% |
| 3509340 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.80 | 75.0 | 5.39e-01 | 100.0% | 47.9% |
| 4940660 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.80 | 73.0 | 5.51e-01 | 100.0% | 57.0% |
| 3263257 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.78 | 64.0 | 5.80e-01 | 87.0% | 91.5% |
| 5058643 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.78 | 71.0 | 5.34e-01 | 100.0% | 57.9% |
| 3801665 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.76 | 58.0 | 5.62e-01 | 80.0% | 80.0% |
| 4575492 | 101.1.6.14 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_29 | 0.69 | 44.0 | 5.20e-01 | 80.0% | 98.5% |
| 4945181 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.63 | 46.0 | 4.24e-01 | 77.0% | 76.2% |
| 4232525 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.61 | 45.0 | 4.08e-01 | 77.0% | 72.6% |
| 3392725 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.58 | 44.0 | 4.02e-01 | 93.0% | 60.0% |
| 3959098 | 191.1.1.17 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_13 | 0.58 | 45.0 | 3.97e-01 | 85.0% | 85.8% |
| 4242802 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.57 | 44.0 | 3.91e-01 | 93.0% | 56.0% |
| 3478383 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.57 | 44.0 | 3.94e-01 | 93.0% | 58.6% |
| 3535295 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.56 | 43.0 | 3.94e-01 | 93.0% | 61.5% |
| 3289554 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.56 | 39.0 | 3.69e-01 | 72.0% | 75.0% |
| 3752445 | 102.1.1.143 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › XTBD | 0.56 | 34.0 | 3.88e-01 | 93.0% | 86.8% |
| 3864857 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 42.0 | 3.83e-01 | 93.0% | 59.3% |
| 3585022 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.55 | 39.0 | 2.92e-01 | 74.0% | 64.2% |
| 3210067 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.54 | 44.0 | 4.33e-01 | 89.0% | 84.5% |
| 3278832 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.54 | 44.0 | 4.02e-01 | 90.0% | 83.0% |
| 5046234 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.52 | 41.0 | 3.41e-01 | 88.0% | 95.4% |
| 4871777 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.51 | 41.0 | 3.71e-01 | 90.0% | 80.5% |
| 4012742 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.51 | 37.0 | 2.81e-01 | 78.0% | 94.0% |