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pig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00240
Bact-Virpig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00240
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-71
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kgmA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.94 | 86.0 | 5.53e-01 | 100.0% | 25.2% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.94 | 88.0 | 5.64e-01 | 100.0% | 29.2% |
| 3b1nA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 39.0 | 2.48e-01 | 76.7% | 13.2% |
| 4ymhD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 40.0 | 2.68e-01 | 71.7% | 18.4% |
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 38.0 | 3.64e-01 | 83.3% | 56.9% |
| 3lsgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 37.0 | 3.82e-01 | 83.3% | 69.1% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.56 | 38.0 | 3.41e-01 | 86.7% | 48.3% |
| 1ds8M02 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.56 | 46.0 | 3.50e-01 | 96.7% | 37.3% |
| 2h8pC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 44.0 | 4.55e-01 | 100.0% | 94.7% |
| 4f03B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 40.0 | 3.16e-01 | 90.0% | 87.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3249428 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.96 | 91.0 | 5.66e-01 | 100.0% | 22.2% |
| 3186355 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.94 | 88.0 | 5.49e-01 | 100.0% | 25.2% |
| 3640423 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.94 | 88.0 | 5.55e-01 | 100.0% | 26.9% |
| 3826050 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.94 | 88.0 | 5.46e-01 | 100.0% | 25.1% |
| 4995762 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.90 | 83.0 | 5.46e-01 | 100.0% | 27.3% |
| 3885941 | 101.1.1.132 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SENP3_5_N | 0.69 | 43.0 | 4.08e-01 | 98.3% | 54.3% |
| 5043236 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.68 | 58.0 | 4.81e-01 | 100.0% | 83.5% |
| 3340355 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 50.0 | 4.76e-01 | 91.7% | 70.0% |
| 3645744 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.65 | 48.0 | 4.21e-01 | 90.0% | 53.3% |
| 3475008 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.64 | 46.0 | 3.59e-01 | 96.7% | 34.8% |
| 3945774 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.60 | 36.0 | 3.92e-01 | 73.3% | 72.0% |
| 3327323 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.59 | 43.0 | 4.21e-01 | 86.7% | 70.8% |
| 4027961 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.54 | 48.0 | 4.55e-01 | 100.0% | 85.7% |
D2
medium
residues 76-116
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5eqjB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 2.37e-01 | 90.2% | 13.2% |
| 3kewB02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.52 | 38.0 | 2.74e-01 | 85.4% | 34.0% |
| 1qgwA00 | 3.90.510.10 | Alpha Beta › Alpha-Beta Complex › Cryptophytan Phycoerythrin (Alpha-1 Chain); Chain A › Phycoerythrin alpha chain | 0.51 | 39.0 | 3.46e-01 | 100.0% | 60.5% |
| 4lm6A00 | 3.90.510.10 | Alpha Beta › Alpha-Beta Complex › Cryptophytan Phycoerythrin (Alpha-1 Chain); Chain A › Phycoerythrin alpha chain | 0.51 | 40.0 | 3.67e-01 | 100.0% | 69.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4462187 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.66 | 56.0 | 4.23e-01 | 100.0% | 41.0% |
| 3727278 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.64 | 54.0 | 3.46e-01 | 100.0% | 79.1% |
| 4029865 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.62 | 52.0 | 4.09e-01 | 100.0% | 44.2% |
| 3398073 | 325.1.8.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › Ribosomal_L27 | 0.60 | 47.0 | 3.75e-01 | 95.1% | 41.1% |
| 3872986 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.58 | 44.0 | 3.29e-01 | 90.2% | 34.2% |
| 4510690 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.57 | 48.0 | 4.23e-01 | 100.0% | 76.9% |
| 3354684 | 3364.1.1.2 ↗ | few secondary structure elements › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › EPF | 0.56 | 39.0 | 3.79e-01 | 97.6% | 62.7% |
| 4188932 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.54 | 45.0 | 3.39e-01 | 100.0% | 37.3% |
| 4048404 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.53 | 42.0 | 2.63e-01 | 95.1% | 20.0% |