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pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00175
Bact-Virpig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00175
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-91
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 29.0 | 3.64e-01 | 75.8% | 67.3% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 44.0 | 3.91e-01 | 79.1% | 91.0% |
| 2wssW01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.58 | 42.0 | 4.24e-01 | 78.0% | 82.1% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 38.0 | 3.64e-01 | 97.8% | 61.5% |
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.55 | 41.0 | 3.43e-01 | 100.0% | 46.2% |
| 7lb8B02 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.54 | 45.0 | 3.20e-01 | 93.4% | 44.2% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.52 | 34.0 | 3.83e-01 | 93.4% | 93.8% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 36.0 | 3.47e-01 | 71.4% | 87.7% |
| 4bjaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 40.0 | 3.20e-01 | 83.5% | 91.2% |
| 2ddhA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.51 | 40.0 | 3.68e-01 | 96.7% | 65.3% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.51 | 35.0 | 3.67e-01 | 80.2% | 78.0% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.50 | 38.0 | 3.90e-01 | 98.9% | 85.4% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 36.0 | 3.77e-01 | 74.7% | 89.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3380616 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.64 | 46.0 | 4.81e-01 | 97.8% | 81.2% |
| 3786366 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.63 | 45.0 | 5.01e-01 | 97.8% | 97.1% |
| 3935680 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.61 | 41.0 | 4.68e-01 | 92.3% | 96.9% |
| 3925495 | 189.1.1.1 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RasGAP | 0.54 | 39.0 | 2.63e-01 | 78.0% | 79.8% |
| 3640808 | 632.7.1.52 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Sds3 | 0.53 | 39.0 | 3.96e-01 | 97.8% | 77.8% |
| 3648998 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.52 | 35.0 | 3.61e-01 | 70.3% | 80.0% |
| 4310744 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.50 | 37.0 | 3.14e-01 | 79.1% | 44.4% |
| 395385 | 109.23.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 | 0.50 | 44.0 | 3.86e-01 | 98.9% | 88.7% |
D2
medium
residues 123-213
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00049__D137-204
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24308.2 best | DUF7487 | 31.5 | 2.20e-07 | 95.6% | 29.1% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ofsA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 41.0 | 3.34e-01 | 90.1% | 76.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3481381 | 109.4.1.472 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RAI16-like | 0.52 | 43.0 | 3.28e-01 | 93.4% | 93.8% |
| 3486978 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 43.0 | 3.25e-01 | 95.6% | 93.3% |