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pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00221

Bact-Vir

pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00221

Identity

Kingdom:
phage

Quality

73.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-49
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07282.19 best Cas12f1-like_TNB 28.4 2.10e-06 100.0% 63.3%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q35A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 42.0 3.08e-01 100.0% 35.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5072202 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.86 76.0 5.01e-01 100.0% 25.3%
5075582 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.84 73.0 4.64e-01 100.0% 20.9%
5011867 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.78 59.0 4.02e-01 100.0% 23.8%
5005258 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.78 60.0 3.90e-01 100.0% 20.0%
4941496 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.72 56.0 3.65e-01 100.0% 20.0%
4589834 284.1.1.27 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › PF27392 0.55 33.0 2.66e-01 93.8% 30.1%