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pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00251
Bact-Virpig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00251
Identity
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-126
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.81 | 50.0 | 4.54e-01 | 84.4% | 47.9% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.78 | 65.0 | 5.45e-01 | 100.0% | 55.2% |
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.76 | 62.0 | 5.44e-01 | 100.0% | 60.0% |
| 1jkgB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.75 | 50.0 | 4.17e-01 | 86.2% | 41.1% |
| 3f7xA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 48.0 | 4.47e-01 | 91.7% | 54.1% |
| 1nqnA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.72 | 53.0 | 5.22e-01 | 100.0% | 71.2% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.69 | 52.0 | 5.08e-01 | 100.0% | 71.7% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.68 | 64.0 | 5.04e-01 | 100.0% | 71.4% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.68 | 56.0 | 4.96e-01 | 100.0% | 61.3% |
| 3ub1A01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 45.0 | 4.15e-01 | 77.1% | 55.1% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.65 | 60.0 | 4.82e-01 | 100.0% | 62.7% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.64 | 41.0 | 4.85e-01 | 75.2% | 93.5% |
| 2cw9A00 | 3.10.450.240 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 47.0 | 3.99e-01 | 84.4% | 46.7% |
| 1yc9A02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.63 | 44.0 | 5.01e-01 | 78.9% | 96.4% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.63 | 43.0 | 4.03e-01 | 89.0% | 57.0% |
| 4ccvA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 44.0 | 4.35e-01 | 86.2% | 68.7% |
| 1q42A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 45.0 | 3.97e-01 | 83.5% | 51.6% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 39.0 | 3.40e-01 | 97.2% | 40.5% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.61 | 55.0 | 4.61e-01 | 100.0% | 75.1% |
| 2cwzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 46.0 | 4.30e-01 | 79.8% | 85.4% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 46.0 | 4.31e-01 | 81.7% | 85.3% |
| 4rljA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 46.0 | 4.18e-01 | 79.8% | 99.3% |
| 4k3bA06 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.59 | 53.0 | 3.68e-01 | 100.0% | 69.6% |
| 2bmoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 3.51e-01 | 96.3% | 41.8% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.58 | 54.0 | 3.96e-01 | 100.0% | 56.6% |
| 1tlyA00 | 2.40.230.20 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like | 0.58 | 53.0 | 4.04e-01 | 100.0% | 51.4% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.57 | 53.0 | 3.64e-01 | 100.0% | 61.0% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.57 | 47.0 | 4.15e-01 | 96.3% | 61.9% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 51.0 | 3.32e-01 | 96.3% | 24.5% |
| 2pfcA00 | 3.10.129.30 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain | 0.56 | 51.0 | 4.49e-01 | 100.0% | 88.1% |
| 2xmxA02 | 3.30.450.400 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Colicin M, catalytic domain | 0.56 | 51.0 | 4.81e-01 | 100.0% | 92.3% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 46.0 | 3.84e-01 | 91.7% | 51.6% |
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.55 | 42.0 | 4.39e-01 | 92.7% | 87.8% |
| 1g6q102 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.55 | 50.0 | 4.20e-01 | 100.0% | 94.6% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.55 | 50.0 | 4.05e-01 | 100.0% | 77.6% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 37.0 | 2.92e-01 | 97.2% | 31.7% |
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.55 | 49.0 | 3.30e-01 | 99.1% | 97.4% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 4.07e-01 | 83.5% | 88.4% |
| 4k02A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 48.0 | 4.62e-01 | 99.1% | 95.3% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.54 | 48.0 | 3.90e-01 | 99.1% | 96.2% |
| 5kbzB00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.54 | 47.0 | 3.44e-01 | 98.2% | 40.6% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 45.0 | 2.92e-01 | 95.4% | 19.0% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 48.0 | 3.00e-01 | 100.0% | 69.3% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 45.0 | 2.89e-01 | 97.2% | 21.4% |
| 1tk1A00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.53 | 44.0 | 3.56e-01 | 92.7% | 94.5% |
| 5fubA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.53 | 47.0 | 3.95e-01 | 99.1% | 95.7% |
| 3b7kC02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 44.0 | 4.40e-01 | 90.8% | 100.0% |
| 4c08A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.52 | 46.0 | 3.91e-01 | 98.2% | 95.6% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.52 | 44.0 | 3.03e-01 | 96.3% | 53.4% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.52 | 45.0 | 2.93e-01 | 97.2% | 21.6% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.51 | 45.0 | 2.99e-01 | 96.3% | 33.5% |
| 7vu0A01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 46.0 | 3.10e-01 | 100.0% | 31.1% |
| 6dnzA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.50 | 45.0 | 3.81e-01 | 98.2% | 95.5% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4283551 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.76 | 72.0 | 5.64e-01 | 100.0% | 55.2% |
| 4299005 | 5084.1.1.21 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TSA | 0.75 | 61.0 | 5.01e-01 | 100.0% | 49.5% |
| 1117891 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.69 | 53.0 | 5.07e-01 | 100.0% | 70.5% |
| 3970312 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.69 | 63.0 | 5.21e-01 | 100.0% | 58.3% |
| 3838321 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.69 | 65.0 | 5.05e-01 | 100.0% | 60.1% |
| 3839675 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.68 | 61.0 | 5.05e-01 | 100.0% | 57.5% |
| 3838622 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.68 | 64.0 | 4.97e-01 | 100.0% | 50.7% |
| 3840054 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.68 | 57.0 | 5.26e-01 | 100.0% | 70.7% |
| 3164124 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.67 | 60.0 | 5.77e-01 | 100.0% | 85.8% |
| 3977398 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.66 | 53.0 | 4.68e-01 | 100.0% | 58.1% |
| 5081121 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.66 | 61.0 | 5.17e-01 | 100.0% | 70.9% |
| 3838382 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.66 | 62.0 | 4.57e-01 | 100.0% | 52.1% |
| 4009329 | 5084.5.1.27 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › NfrA_C | 0.64 | 60.0 | 4.50e-01 | 100.0% | 94.7% |
| 3615728 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.64 | 49.0 | 3.24e-01 | 93.6% | 21.5% |
| 4581432 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.63 | 57.0 | 4.82e-01 | 100.0% | 68.3% |
| 5080405 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.62 | 57.0 | 4.97e-01 | 100.0% | 68.9% |
| 3405242 | 5084.5.1.37 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C | 0.61 | 47.0 | 3.96e-01 | 98.2% | 48.6% |
| 3595171 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 48.0 | 3.74e-01 | 84.4% | 40.9% |
| 3965061 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.60 | 56.0 | 4.16e-01 | 100.0% | 61.2% |
| 3203073 | 867.1.1.1 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas | 0.60 | 50.0 | 3.55e-01 | 93.6% | 79.5% |
| 3971932 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.59 | 54.0 | 3.34e-01 | 100.0% | 26.4% |
| 3971597 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.59 | 54.0 | 3.71e-01 | 99.1% | 34.1% |
| 3964265 | 5084.1.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter | 0.58 | 47.0 | 4.26e-01 | 98.2% | 64.8% |
| 3726289 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.57 | 51.0 | 4.15e-01 | 99.1% | 96.1% |
| 3481193 | 867.1.1.0 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase | 0.57 | 49.0 | 3.54e-01 | 96.3% | 72.6% |
| 3933957 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.56 | 46.0 | 4.04e-01 | 96.3% | 59.4% |
| 4353229 | 5084.5.4.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein | 0.56 | 50.0 | 3.70e-01 | 100.0% | 66.2% |
| 4219386 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.55 | 49.0 | 3.42e-01 | 99.1% | 55.2% |
| 1760411 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.55 | 36.0 | 4.11e-01 | 91.7% | 90.1% |
| 3907123 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.54 | 49.0 | 4.09e-01 | 99.1% | 70.3% |
| 3613163 | 1116.1.1.0 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain | 0.54 | 41.0 | 3.39e-01 | 80.7% | 94.5% |
| 4029197 | 867.1.1.1 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas | 0.54 | 45.0 | 3.34e-01 | 93.6% | 85.6% |
| 3173251 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.53 | 46.0 | 3.98e-01 | 98.2% | 60.0% |
| 4005087 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.53 | 49.0 | 3.75e-01 | 100.0% | 75.1% |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.52 | 48.0 | 3.23e-01 | 100.0% | 71.5% |
| 3506543 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.52 | 47.0 | 3.14e-01 | 100.0% | 30.0% |
| 3824851 | 5084.5.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF30985 | 0.51 | 46.0 | 4.02e-01 | 100.0% | 66.7% |
D2
high
residues 195-295
Domain cluster:
rep: LD_Run2_13_scaffold_0_prodigal-single.1__X__X__00112__D280-376
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00691.26 best | OmpA | 37.8 | 2.90e-09 | 90.1% | 79.6% |