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pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00275
Bact-Virpig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00275
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-135
Domain cluster:
rep: NC_018843.1__YP_006906699.1__SSU5_067__00067__D20-109
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 39.0 | 4.87e-01 | 90.6% | 93.7% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.65 | 58.0 | 5.14e-01 | 100.0% | 85.8% |
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 59.0 | 4.85e-01 | 100.0% | 76.9% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 58.0 | 4.98e-01 | 98.1% | 96.9% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 55.0 | 4.83e-01 | 100.0% | 65.6% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.63 | 54.0 | 5.36e-01 | 100.0% | 90.8% |
| 3rwxA01 | 2.40.128.340 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 56.0 | 5.36e-01 | 99.1% | 92.5% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 55.0 | 4.53e-01 | 100.0% | 86.8% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 53.0 | 4.83e-01 | 100.0% | 71.8% |
| 3l4rA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 55.0 | 4.88e-01 | 99.1% | 77.5% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 54.0 | 5.01e-01 | 99.1% | 93.3% |
| 6psyA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 53.0 | 4.14e-01 | 98.1% | 99.6% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 54.0 | 4.89e-01 | 100.0% | 76.2% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 53.0 | 4.84e-01 | 98.1% | 95.6% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 53.0 | 4.71e-01 | 99.1% | 74.5% |
| 3pijA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 44.0 | 3.05e-01 | 80.2% | 44.7% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 50.0 | 3.81e-01 | 95.3% | 61.2% |
| 2cztA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 52.0 | 4.60e-01 | 100.0% | 74.2% |
| 1dzkA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 52.0 | 4.68e-01 | 100.0% | 73.6% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 51.0 | 4.62e-01 | 100.0% | 94.6% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 44.0 | 3.91e-01 | 81.1% | 97.3% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.56 | 45.0 | 3.75e-01 | 88.7% | 89.2% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.55 | 49.0 | 4.73e-01 | 100.0% | 94.2% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 44.0 | 2.87e-01 | 86.8% | 92.2% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 29.0 | 3.50e-01 | 100.0% | 80.3% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 45.0 | 4.23e-01 | 90.6% | 72.7% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 4.30e-01 | 91.5% | 85.6% |
| 3h3hB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 4.40e-01 | 91.5% | 88.3% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 41.0 | 4.01e-01 | 91.5% | 74.6% |
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 42.0 | 3.10e-01 | 85.8% | 88.7% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 46.0 | 4.27e-01 | 100.0% | 78.7% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 47.0 | 4.27e-01 | 100.0% | 80.3% |
| 3f7wA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 39.0 | 4.23e-01 | 98.1% | 92.3% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 42.0 | 4.49e-01 | 98.1% | 100.0% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.52 | 40.0 | 3.65e-01 | 99.1% | 61.7% |
| 3oblA00 | 2.40.128.450 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 40.0 | 3.76e-01 | 100.0% | 67.4% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 41.0 | 3.68e-01 | 84.9% | 85.8% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 35.0 | 3.14e-01 | 71.7% | 52.1% |
| 2gxfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 42.0 | 4.10e-01 | 92.5% | 94.9% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 4.09e-01 | 94.3% | 88.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700971 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 56.0 | 4.56e-01 | 100.0% | 97.1% |
| 3062889 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.63 | 57.0 | 4.81e-01 | 99.1% | 91.4% |
| 3967771 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.62 | 57.0 | 5.30e-01 | 100.0% | 93.8% |
| 3941288 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 57.0 | 5.07e-01 | 99.1% | 94.5% |
| 4147907 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.62 | 56.0 | 5.08e-01 | 99.1% | 94.3% |
| 4057965 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.61 | 55.0 | 4.46e-01 | 100.0% | 83.4% |
| 3795930 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.61 | 56.0 | 5.11e-01 | 99.1% | 92.8% |
| 3278301 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.61 | 51.0 | 5.13e-01 | 100.0% | 91.4% |
| 3624142 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.61 | 56.0 | 5.09e-01 | 99.1% | 92.9% |
| 3233672 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.61 | 39.0 | 4.03e-01 | 91.5% | 68.0% |
| 3615163 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 43.0 | 4.34e-01 | 84.0% | 72.9% |
| 4969694 | 4200.1.1.0 ↗ | beta barrels › YmcC-like › YmcC-like › YmcC-like | 0.60 | 51.0 | 4.42e-01 | 94.3% | 93.5% |
| 3705644 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.60 | 53.0 | 4.91e-01 | 100.0% | 95.7% |
| 4963141 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.58 | 47.0 | 3.81e-01 | 88.7% | 97.1% |
| 4958640 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.58 | 51.0 | 4.36e-01 | 99.1% | 99.4% |
| None | — | 0.56 | 46.0 | 3.61e-01 | 89.6% | 52.6% | |
| 4959370 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.56 | 49.0 | 4.21e-01 | 97.2% | 97.0% |
| 3969377 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 36.0 | 4.28e-01 | 89.6% | 95.9% |
| 3904275 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.55 | 44.0 | 2.86e-01 | 86.8% | 92.3% |
| 5046362 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 49.0 | 3.65e-01 | 100.0% | 89.3% |
| 4793345 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.54 | 46.0 | 4.65e-01 | 99.1% | 96.3% |
| 3971583 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 41.0 | 3.76e-01 | 81.1% | 75.0% |
| 4952166 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.54 | 44.0 | 3.28e-01 | 88.7% | 70.9% |
| 3691812 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.53 | 48.0 | 4.04e-01 | 100.0% | 61.1% |
| 3735466 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 47.0 | 4.06e-01 | 100.0% | 75.3% |
| 3453961 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 40.0 | 2.77e-01 | 91.5% | 24.0% |
| 3988067 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 39.0 | 4.21e-01 | 93.4% | 96.5% |
| 185415 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.52 | 42.0 | 4.49e-01 | 98.1% | 100.0% |
| 3706524 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.51 | 42.0 | 3.15e-01 | 92.5% | 58.6% |
| 3314558 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.50 | 41.0 | 3.71e-01 | 90.6% | 64.6% |
| 3610464 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.50 | 43.0 | 2.86e-01 | 92.5% | 39.8% |