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pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00095
Bact-Virpig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00095
Identity
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 24-85
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 38.0 | 2.62e-01 | 77.4% | 33.8% |
| 3e3uA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.53 | 38.0 | 2.72e-01 | 77.4% | 44.9% |
| 4cbgD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 38.0 | 2.94e-01 | 85.5% | 73.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3183184 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.59 | 42.0 | 2.23e-01 | 75.8% | 10.4% |
| 3691193 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.52 | 42.0 | 2.32e-01 | 95.2% | 13.7% |
| 1837178 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 39.0 | 2.80e-01 | 83.9% | 58.6% |
D2
medium
residues 86-145
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.73 | 51.0 | 3.42e-01 | 78.3% | 20.7% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 44.0 | 4.28e-01 | 70.0% | 56.7% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 45.0 | 4.37e-01 | 73.3% | 58.8% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.68 | 47.0 | 3.87e-01 | 73.3% | 70.3% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.67 | 43.0 | 4.20e-01 | 70.0% | 58.2% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 43.0 | 4.36e-01 | 73.3% | 67.2% |
| 1eu3A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 41.0 | 3.76e-01 | 71.7% | 92.5% |
| 2kt4B01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 45.0 | 3.50e-01 | 83.3% | 56.3% |
| 3zh8C01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 40.0 | 3.27e-01 | 70.0% | 73.0% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 43.0 | 3.17e-01 | 80.0% | 69.5% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 45.0 | 3.64e-01 | 83.3% | 85.7% |
| 4crsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 40.0 | 3.12e-01 | 70.0% | 85.1% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.59 | 40.0 | 3.35e-01 | 71.7% | 95.5% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.58 | 40.0 | 3.81e-01 | 73.3% | 66.2% |
| 1m2xA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 39.0 | 2.71e-01 | 71.7% | 27.4% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.58 | 39.0 | 2.77e-01 | 70.0% | 24.6% |
| 2yvkA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.57 | 46.0 | 3.57e-01 | 93.3% | 92.6% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 44.0 | 3.46e-01 | 90.0% | 78.8% |
| 3nqkA02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.56 | 40.0 | 3.13e-01 | 83.3% | 81.9% |
| 2v6eA03 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.55 | 41.0 | 2.81e-01 | 81.7% | 24.4% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 38.0 | 3.53e-01 | 78.3% | 78.3% |
| 1p5tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.16e-01 | 76.7% | 61.3% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.52 | 42.0 | 2.74e-01 | 100.0% | 79.3% |
| 7xhlD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 41.0 | 2.71e-01 | 90.0% | 92.9% |
| 1j0wB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 37.0 | 3.17e-01 | 78.3% | 63.1% |
| 2m1hA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.49e-01 | 95.0% | 77.3% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 38.0 | 3.39e-01 | 83.3% | 81.3% |
| 3rd7A00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.51 | 40.0 | 2.70e-01 | 93.3% | 77.8% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 37.0 | 2.84e-01 | 88.3% | 65.9% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 40.0 | 3.11e-01 | 98.3% | 80.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3233461 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 46.0 | 4.68e-01 | 70.0% | 61.7% |
| 3888254 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 48.0 | 5.48e-01 | 71.7% | 88.9% |
| 3616622 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 47.0 | 4.66e-01 | 73.3% | 61.9% |
| 4251101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 52.0 | 4.57e-01 | 81.7% | 52.9% |
| 4632710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 47.0 | 5.29e-01 | 71.7% | 88.9% |
| 3266107 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.72 | 44.0 | 5.34e-01 | 78.3% | 95.0% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 51.0 | 4.49e-01 | 76.7% | 75.3% |
| 4110324 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.70 | 50.0 | 4.57e-01 | 81.7% | 57.5% |
| 4599427 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.69 | 46.0 | 3.56e-01 | 81.7% | 32.3% |
| 3288884 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 46.0 | 3.82e-01 | 70.0% | 41.9% |
| 4334562 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.68 | 46.0 | 3.60e-01 | 73.3% | 32.3% |
| 4994226 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.67 | 45.0 | 3.59e-01 | 71.7% | 33.6% |
| 4057742 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.67 | 45.0 | 4.43e-01 | 73.3% | 64.6% |
| 5021205 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.67 | 45.0 | 3.51e-01 | 73.3% | 32.3% |
| 3177048 | 719.2.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like | 0.67 | 45.0 | 3.90e-01 | 71.7% | 86.3% |
| 4936051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 45.0 | 4.69e-01 | 73.3% | 78.2% |
| 4515154 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.66 | 44.0 | 3.61e-01 | 73.3% | 36.5% |
| 3172576 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.65 | 45.0 | 3.62e-01 | 71.7% | 76.5% |
| 4311788 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.65 | 43.0 | 3.53e-01 | 70.0% | 35.7% |
| 4329624 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.65 | 44.0 | 3.68e-01 | 73.3% | 40.0% |
| 4123140 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.65 | 44.0 | 3.68e-01 | 73.3% | 38.9% |
| 4380562 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.65 | 58.0 | 4.01e-01 | 100.0% | 74.0% |
| 3947541 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.65 | 43.0 | 4.59e-01 | 71.7% | 82.0% |
| 4268790 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.64 | 42.0 | 3.32e-01 | 70.0% | 31.5% |
| 5007378 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.64 | 43.0 | 4.45e-01 | 70.0% | 76.4% |
| 4399266 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.63 | 42.0 | 3.48e-01 | 73.3% | 36.5% |
| 3982411 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.62 | 40.0 | 3.98e-01 | 70.0% | 60.0% |
| 3979564 | 4246.1.1.0 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit | 0.62 | 40.0 | 3.98e-01 | 70.0% | 60.0% |
| 4990017 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.61 | 41.0 | 3.03e-01 | 70.0% | 72.9% |
| 5001100 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.61 | 42.0 | 3.08e-01 | 73.3% | 74.1% |
| 4575466 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.61 | 40.0 | 3.99e-01 | 71.7% | 61.5% |
| 3475799 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.60 | 42.0 | 3.38e-01 | 75.0% | 50.4% |
| 3749631 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.59 | 48.0 | 4.14e-01 | 96.7% | 55.2% |
| 3693476 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 41.0 | 3.58e-01 | 76.7% | 46.5% |
| 2831853 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.57 | 48.0 | 3.60e-01 | 96.7% | 35.8% |
| 4397221 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 38.0 | 3.73e-01 | 70.0% | 63.1% |
| 5061447 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 39.0 | 3.16e-01 | 73.3% | 40.0% |
| 5018514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 41.0 | 3.26e-01 | 78.3% | 73.3% |
| 3830725 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 43.0 | 4.11e-01 | 90.0% | 86.7% |
| 3609310 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 43.0 | 3.42e-01 | 90.0% | 88.1% |
| 3937835 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.54 | 46.0 | 3.74e-01 | 98.3% | 55.8% |
| 4525886 | 109.4.1.1360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p | 0.54 | 42.0 | 2.50e-01 | 93.3% | 29.5% |
| 4020990 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.51 | 40.0 | 3.10e-01 | 91.7% | 79.4% |
| 3904071 | 214.1.1.11 ↗ | a+b two layers › SH2 › SH2 › SH2 › PF27628 | 0.50 | 37.0 | 3.11e-01 | 85.0% | 57.5% |