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pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00104
Bact-Virpig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00104
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-12_141-235
Domain cluster:
rep: MT457475.1__QKE60850.1__X__00045__D81-170
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.67 | 61.0 | 5.52e-01 | 100.0% | 95.0% |
| 1dkiC01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.65 | 56.0 | 4.47e-01 | 100.0% | 49.0% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 41.0 | 4.61e-01 | 87.5% | 85.7% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 52.0 | 4.87e-01 | 95.2% | 72.0% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 52.0 | 4.92e-01 | 91.3% | 82.3% |
| 2jtcA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.61 | 56.0 | 4.14e-01 | 100.0% | 98.8% |
| 2mc2A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 48.0 | 3.82e-01 | 85.6% | 100.0% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 43.0 | 4.30e-01 | 85.6% | 73.6% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 4.47e-01 | 87.5% | 100.0% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 44.0 | 4.37e-01 | 85.6% | 77.3% |
| 3ghgB02 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.55 | 45.0 | 3.41e-01 | 91.3% | 79.0% |
| 5pabH01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 40.0 | 3.74e-01 | 79.8% | 89.8% |
| 2vgmA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.53 | 42.0 | 3.99e-01 | 91.3% | 73.8% |
| 2bhgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 37.0 | 3.81e-01 | 76.0% | 86.3% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.52e-01 | 78.8% | 82.6% |
| 3hpeA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.51 | 38.0 | 3.35e-01 | 81.7% | 98.2% |
| 5escA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 38.0 | 3.69e-01 | 81.7% | 97.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4432457 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.72 | 45.0 | 5.33e-01 | 91.3% | 94.3% |
| 4031510 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 46.0 | 4.94e-01 | 89.4% | 77.8% |
| 4386702 | 219.1.1.45 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 | 0.70 | 63.0 | 4.49e-01 | 98.1% | 95.5% |
| 3238915 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.69 | 60.0 | 4.16e-01 | 93.3% | 73.7% |
| 3278485 | 219.1.1.49 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C70 | 0.68 | 64.0 | 5.16e-01 | 100.0% | 83.8% |
| 4183853 | 4.1.1.435 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29216 | 0.66 | 43.0 | 5.07e-01 | 88.5% | 98.6% |
| 4118226 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 41.0 | 4.83e-01 | 91.3% | 94.3% |
| 3972547 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.65 | 58.0 | 4.88e-01 | 93.3% | 86.3% |
| 3627576 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 39.0 | 4.76e-01 | 82.7% | 100.0% |
| 3584555 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 41.0 | 4.77e-01 | 85.6% | 98.6% |
| 4425420 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.61 | 45.0 | 4.90e-01 | 91.3% | 94.1% |
| 5024617 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.61 | 48.0 | 5.00e-01 | 91.3% | 92.6% |
| 4278559 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.54 | 44.0 | 4.33e-01 | 84.6% | 98.2% |
| 3391463 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.54 | 46.0 | 4.32e-01 | 91.3% | 86.4% |
| 2429452 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.54 | 40.0 | 3.75e-01 | 78.8% | 87.9% |
| 3390505 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 40.0 | 3.07e-01 | 78.8% | 85.0% |
| 3288278 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.53 | 40.0 | 3.63e-01 | 78.8% | 84.4% |
| 3706549 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 45.0 | 3.30e-01 | 98.1% | 66.2% |
| 3990594 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.53 | 43.0 | 3.47e-01 | 91.3% | 76.7% |
| 3787756 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.52 | 40.0 | 3.52e-01 | 81.7% | 90.5% |
| 3988859 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.52 | 38.0 | 3.82e-01 | 87.5% | 75.2% |
| 3912620 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.52 | 38.0 | 4.25e-01 | 78.8% | 100.0% |
| 3482706 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 41.0 | 3.52e-01 | 85.6% | 57.1% |
| 3547457 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.52 | 42.0 | 3.38e-01 | 91.3% | 80.4% |
| 5040464 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 42.0 | 4.36e-01 | 87.5% | 100.0% |
| 3838633 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.51 | 39.0 | 3.37e-01 | 81.7% | 97.6% |
| 3744808 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.51 | 39.0 | 3.25e-01 | 81.7% | 86.5% |
| 5071939 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.51 | 38.0 | 3.32e-01 | 78.8% | 93.1% |
| 4072524 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.51 | 42.0 | 4.19e-01 | 91.3% | 85.5% |
| 4159881 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.51 | 39.0 | 4.07e-01 | 97.1% | 90.5% |
| 5051898 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.50 | 37.0 | 3.37e-01 | 78.8% | 78.4% |
| 4073608 | 1.1.5.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 | 0.50 | 38.0 | 3.23e-01 | 80.8% | 96.1% |
D2
high
residues 22-138
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.61 | 36.0 | 4.10e-01 | 91.5% | 79.1% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 36.0 | 4.22e-01 | 99.1% | 90.5% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 29.0 | 3.53e-01 | 99.1% | 75.0% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 37.0 | 3.33e-01 | 75.2% | 92.4% |
| 1v4aA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.51 | 37.0 | 3.41e-01 | 74.4% | 87.6% |