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pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00116

Bact-Vir

pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00116

Identity

Kingdom:
phage

Quality

66.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 88-205
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hl7A00 1.10.8.640 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Cytochrome C biogenesis protein 0.57 38.0 4.46e-01 79.7% 96.3%
2wzfA01 1.10.1740.130 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.56 40.0 4.31e-01 74.6% 89.4%
4pc3C02 3.30.479.20 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain 0.54 35.0 4.05e-01 70.3% 90.7%
2a19A02 1.10.150.190 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 0.53 31.0 3.54e-01 81.4% 78.8%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 30.0 3.66e-01 98.3% 97.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3684646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 34.0 4.08e-01 92.4% 80.0%
3883720 7575.1.1.1 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 0.53 41.0 3.29e-01 80.5% 89.8%
4001520 4004.1.1.0 beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like 0.50 44.0 3.59e-01 98.3% 81.7%
D2 medium residues 8-73
PDB