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pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00174
Bact-Virpig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00174
Identity
- Kingdom:
- phage
Quality
65.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-142_274-328
Domain cluster:
rep: BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00140__D39-172_299-355
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ciwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 58.0 | 4.59e-01 | 97.1% | 76.7% |
| 1fs0G01 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.64 | 44.0 | 4.96e-01 | 95.4% | 93.1% |
| 1tv8B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 57.0 | 4.63e-01 | 97.7% | 86.5% |
| 4cu7A03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 49.0 | 3.91e-01 | 81.1% | 77.3% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 55.0 | 4.60e-01 | 96.0% | 90.4% |
| 4m7tA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 56.0 | 5.01e-01 | 97.7% | 78.5% |
| 2oodA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 53.0 | 4.34e-01 | 96.0% | 84.2% |
| 1jqlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 34.0 | 3.78e-01 | 70.9% | 69.3% |
| 1to3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 4.36e-01 | 94.9% | 94.2% |
| 3niyA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 45.0 | 3.66e-01 | 80.0% | 71.5% |
| 2a5hA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 52.0 | 4.35e-01 | 94.3% | 79.0% |
| 6xigA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 50.0 | 4.21e-01 | 93.7% | 91.1% |
| 4qrnB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 50.0 | 4.06e-01 | 94.9% | 91.1% |
| 1fdyB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 53.0 | 4.43e-01 | 98.9% | 96.6% |
| 2hisA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 44.0 | 3.65e-01 | 80.0% | 74.0% |
| 4ur7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 52.0 | 4.35e-01 | 98.9% | 93.1% |
| 4xkyA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 52.0 | 4.37e-01 | 98.9% | 82.9% |
| 3n2xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 52.0 | 4.36e-01 | 98.9% | 96.0% |
| 2zdsB00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 44.0 | 3.62e-01 | 80.6% | 79.5% |
| 5c54G00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 52.0 | 4.30e-01 | 98.9% | 81.4% |
| 1yacA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.57 | 44.0 | 4.20e-01 | 80.0% | 84.8% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.57 | 41.0 | 4.36e-01 | 73.1% | 95.4% |
| 3d0cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 52.0 | 4.32e-01 | 98.9% | 93.7% |
| 5ot1A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 50.0 | 4.01e-01 | 96.6% | 90.5% |
| 3b0pA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 41.0 | 3.72e-01 | 73.7% | 59.1% |
| 3tuuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 51.0 | 4.25e-01 | 98.9% | 87.3% |
| 3eb2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 51.0 | 4.34e-01 | 98.9% | 96.9% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 51.0 | 4.15e-01 | 97.7% | 86.0% |
| 3kw3A02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.56 | 40.0 | 3.75e-01 | 72.0% | 94.3% |
| 3h5dA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 51.0 | 4.29e-01 | 99.4% | 97.7% |
| 5lnmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 39.0 | 4.14e-01 | 70.3% | 89.3% |
| 7d88A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 50.0 | 3.93e-01 | 98.3% | 66.9% |
| 6i3mE02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.55 | 40.0 | 3.84e-01 | 74.3% | 99.0% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 50.0 | 4.25e-01 | 100.0% | 100.0% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.54 | 42.0 | 4.64e-01 | 80.6% | 99.3% |
| 2xkbL00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.54 | 42.0 | 3.30e-01 | 81.7% | 60.4% |
| 3g8rA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 4.20e-01 | 95.4% | 82.0% |
| 4d8qF03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.52 | 36.0 | 3.70e-01 | 92.0% | 74.1% |
| 3v3tA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.52 | 40.0 | 3.89e-01 | 81.7% | 95.6% |
| 2qy6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 43.0 | 3.97e-01 | 90.3% | 88.5% |
| 1g7uA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 45.0 | 3.89e-01 | 95.4% | 77.5% |
| 4eziA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 40.0 | 3.48e-01 | 81.1% | 75.1% |
| 6zxbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 34.0 | 3.92e-01 | 70.9% | 90.0% |
| 2o2zA00 | 3.40.50.10680 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CofD-like domains | 0.51 | 40.0 | 3.34e-01 | 81.7% | 99.0% |
| 7b7pA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.51 | 36.0 | 3.21e-01 | 72.6% | 98.5% |
| 3i6eA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.51 | 46.0 | 4.07e-01 | 97.7% | 92.9% |
| 5z1aA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 45.0 | 3.77e-01 | 97.7% | 78.9% |
| 6ia6A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.75e-01 | 91.4% | 100.0% |
| 2p10C01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 42.0 | 3.82e-01 | 91.4% | 92.6% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048003 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 70.0 | 5.54e-01 | 100.0% | 90.7% |
| 4935176 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 69.0 | 5.37e-01 | 98.9% | 87.5% |
| 3965602 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 67.0 | 5.51e-01 | 97.1% | 100.0% |
| 5079463 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 68.0 | 5.41e-01 | 98.3% | 92.6% |
| 4930546 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 66.0 | 5.28e-01 | 100.0% | 92.6% |
| 4959771 | 2002.1.1.450 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › LAM_C | 0.69 | 53.0 | 3.92e-01 | 78.9% | 67.5% |
| 4325818 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 52.0 | 4.17e-01 | 78.9% | 67.8% |
| 5063085 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 52.0 | 4.45e-01 | 78.9% | 83.7% |
| 4971179 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.66 | 58.0 | 4.63e-01 | 94.3% | 82.2% |
| 4929335 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.66 | 58.0 | 4.48e-01 | 93.7% | 76.8% |
| 4248687 | 2002.1.1.125 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM | 0.66 | 60.0 | 4.51e-01 | 98.3% | 76.8% |
| 3976773 | 2002.1.1.126 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Radical_SAM_C | 0.65 | 50.0 | 4.14e-01 | 80.0% | 86.7% |
| 4990800 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 58.0 | 4.60e-01 | 94.9% | 82.6% |
| 4063088 | 2002.1.1.205 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,CofH_C | 0.65 | 57.0 | 4.42e-01 | 93.7% | 78.6% |
| 5033154 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 45.0 | 3.83e-01 | 70.9% | 92.3% |
| 4589136 | 2002.1.1.205 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,CofH_C | 0.65 | 57.0 | 4.40e-01 | 93.7% | 77.3% |
| 5077489 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 47.0 | 4.12e-01 | 74.9% | 70.6% |
| 4453338 | 2002.1.1.205 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,CofH_C | 0.64 | 57.0 | 4.40e-01 | 96.0% | 76.1% |
| 4943759 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 56.0 | 4.39e-01 | 93.7% | 81.4% |
| 5018852 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 57.0 | 4.39e-01 | 96.6% | 84.7% |
| 4562658 | 2002.1.1.205 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,CofH_C | 0.63 | 55.0 | 4.22e-01 | 93.7% | 72.9% |
| 4971473 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 48.0 | 4.05e-01 | 78.9% | 97.9% |
| 4987728 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 46.0 | 4.06e-01 | 76.0% | 83.0% |
| 4927079 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 57.0 | 4.31e-01 | 99.4% | 84.4% |
| 5072617 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.62 | 45.0 | 4.20e-01 | 74.9% | 94.5% |
| 4935823 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 47.0 | 3.85e-01 | 80.0% | 81.8% |
| 4985340 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.61 | 44.0 | 4.44e-01 | 73.1% | 99.4% |
| 5081167 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 56.0 | 4.26e-01 | 98.9% | 87.4% |
| 3784926 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.61 | 44.0 | 4.03e-01 | 74.3% | 100.0% |
| 3623828 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.60 | 46.0 | 4.09e-01 | 80.0% | 97.2% |
| 3558352 | 2002.1.1.7 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.59 | 46.0 | 3.60e-01 | 81.7% | 62.7% |
| 4121244 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.59 | 53.0 | 4.32e-01 | 98.9% | 90.3% |
| 5079320 | 2002.1.1.452 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM_C | 0.58 | 50.0 | 4.19e-01 | 94.3% | 94.4% |
| 4393639 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.57 | 52.0 | 4.35e-01 | 98.9% | 81.3% |
| 2527970 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.57 | 52.0 | 4.31e-01 | 98.9% | 92.8% |
| 1842690 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.57 | 52.0 | 4.29e-01 | 98.9% | 80.6% |
| 4990319 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 49.0 | 4.42e-01 | 93.1% | 94.7% |
| 4993642 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.57 | 51.0 | 4.33e-01 | 98.9% | 97.3% |
| 4243396 | 2003.1.1.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH,SDH_C | 0.57 | 42.0 | 4.23e-01 | 76.0% | 81.7% |
| 4154618 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.57 | 51.0 | 4.30e-01 | 98.9% | 94.0% |
| 5048627 | 2003.1.1.123 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF166 | 0.56 | 41.0 | 4.04e-01 | 73.7% | 97.8% |
| 4239720 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.56 | 51.0 | 4.30e-01 | 98.9% | 94.8% |
| 5000459 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.56 | 43.0 | 4.18e-01 | 81.1% | 97.0% |
| 4991622 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.56 | 51.0 | 4.24e-01 | 98.9% | 97.0% |
| 4197890 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.56 | 50.0 | 4.24e-01 | 98.9% | 93.2% |
| 1787656 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.55 | 43.0 | 4.20e-01 | 81.1% | 100.0% |
| 4997631 | 2003.1.1.123 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF166 | 0.55 | 40.0 | 4.37e-01 | 73.7% | 100.0% |
| 4306948 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.55 | 49.0 | 4.15e-01 | 98.9% | 93.3% |
| 3602637 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.55 | 43.0 | 4.01e-01 | 81.1% | 80.5% |
| 3602450 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 42.0 | 3.52e-01 | 80.6% | 75.0% |
| 5065240 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.54 | 39.0 | 3.57e-01 | 74.9% | 92.5% |
| 4945953 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.54 | 42.0 | 3.99e-01 | 81.1% | 96.1% |
| 4444433 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 42.0 | 4.09e-01 | 81.1% | 100.0% |
| 4072874 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.53 | 42.0 | 3.88e-01 | 82.3% | 85.8% |
| 5061836 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.53 | 41.0 | 3.88e-01 | 81.7% | 91.4% |
| 2737081 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.53 | 35.0 | 3.88e-01 | 72.0% | 85.2% |
| 3574305 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.52 | 47.0 | 3.51e-01 | 98.3% | 74.7% |
| 4209330 | 2007.1.2.29 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L | 0.52 | 37.0 | 3.63e-01 | 72.6% | 67.2% |
| 4927931 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.52 | 38.0 | 4.21e-01 | 80.6% | 96.4% |
| 4977028 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.52 | 47.0 | 4.14e-01 | 100.0% | 93.5% |
| 4983562 | 2002.1.1.113 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CdhD | 0.51 | 45.0 | 3.67e-01 | 94.9% | 78.8% |
| 4943492 | 2007.3.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › ATP-grasp_5 | 0.51 | 39.0 | 4.12e-01 | 80.6% | 98.1% |
| 3924471 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 36.0 | 3.45e-01 | 71.4% | 74.5% |
| 3800769 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 35.0 | 3.30e-01 | 70.9% | 92.0% |
| 5067896 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.50 | 39.0 | 3.84e-01 | 81.1% | 92.1% |
| 4461540 | 2007.1.2.29 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L | 0.50 | 37.0 | 3.77e-01 | 78.9% | 76.6% |
D2
medium
residues 143-273
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tigA00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.73 | 48.0 | 5.79e-01 | 70.2% | 100.0% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 55.0 | 4.38e-01 | 78.6% | 47.3% |
| 2yx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 4.85e-01 | 100.0% | 41.4% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.71 | 46.0 | 5.52e-01 | 96.9% | 100.0% |
| 2m71A00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.70 | 49.0 | 5.50e-01 | 100.0% | 94.9% |
| 2ftpA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 61.0 | 4.60e-01 | 95.4% | 44.3% |
| 6xigA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 63.0 | 4.75e-01 | 100.0% | 58.4% |
| 3c8fA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 58.0 | 4.65e-01 | 93.9% | 49.0% |
| 5jipA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 61.0 | 5.04e-01 | 100.0% | 85.0% |
| 6ia6A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 57.0 | 4.45e-01 | 94.7% | 45.7% |
| 4jc0A03 | 3.30.750.200 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.64 | 54.0 | 5.66e-01 | 100.0% | 99.2% |
| 2g3mA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 55.0 | 3.96e-01 | 93.9% | 62.2% |
| 5fc1A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.63 | 57.0 | 4.03e-01 | 100.0% | 39.8% |
| 5fi9A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.63 | 56.0 | 4.03e-01 | 100.0% | 73.8% |
| 3ieiA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 58.0 | 4.34e-01 | 100.0% | 76.1% |
| 3u7vA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 57.0 | 4.11e-01 | 100.0% | 75.6% |
| 2b0cA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.62 | 41.0 | 4.09e-01 | 100.0% | 65.4% |
| 5karA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.62 | 55.0 | 3.95e-01 | 100.0% | 39.3% |
| 4qhrA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.61 | 50.0 | 4.29e-01 | 93.9% | 55.3% |
| 3wqcA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.60 | 52.0 | 4.34e-01 | 93.1% | 61.0% |
| 7e0wA01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.60 | 42.0 | 4.07e-01 | 80.9% | 63.1% |
| 1i4wA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 53.0 | 4.33e-01 | 97.7% | 81.8% |
| 7plsA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 54.0 | 4.04e-01 | 100.0% | 83.8% |
| 3tnjA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 38.0 | 3.94e-01 | 95.4% | 68.6% |
| 4kt7A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 42.0 | 3.48e-01 | 77.9% | 42.3% |
| 1cqzB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.59 | 40.0 | 3.96e-01 | 100.0% | 65.9% |
| 1ep3B02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.59 | 37.0 | 3.95e-01 | 77.9% | 70.9% |
| 5afdA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 3.88e-01 | 96.2% | 41.0% |
| 1kk1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 4.66e-01 | 100.0% | 96.9% |
| 2bmjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 53.0 | 4.80e-01 | 100.0% | 93.7% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 36.0 | 3.65e-01 | 94.7% | 62.0% |
| 1rjgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 52.0 | 4.02e-01 | 98.5% | 68.0% |
| 1ej0A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 50.0 | 4.56e-01 | 99.2% | 86.1% |
| 3s3tA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 39.0 | 3.85e-01 | 72.5% | 69.7% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.56 | 42.0 | 4.01e-01 | 79.4% | 67.8% |
| 2btoA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.55 | 49.0 | 4.00e-01 | 100.0% | 95.8% |
| 3pvsB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 37.0 | 3.57e-01 | 90.8% | 58.3% |
| 2imqX00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.55 | 50.0 | 3.92e-01 | 100.0% | 86.1% |
| 4dapA02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 41.0 | 3.95e-01 | 79.4% | 67.1% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 3.44e-01 | 98.5% | 53.7% |
| 4emyA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 49.0 | 4.02e-01 | 100.0% | 68.5% |
| 1im5A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.54 | 44.0 | 3.93e-01 | 100.0% | 63.1% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 37.0 | 3.20e-01 | 94.7% | 46.0% |
| 3rq1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 48.0 | 3.97e-01 | 100.0% | 68.2% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 38.0 | 3.87e-01 | 94.7% | 73.5% |
| 1ii7A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 48.0 | 3.90e-01 | 100.0% | 54.2% |
| 2o3jB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 46.0 | 3.97e-01 | 95.4% | 88.6% |
| 2hpvA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 45.0 | 3.87e-01 | 93.1% | 94.2% |
| 1w5sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.90e-01 | 90.8% | 66.8% |
| 3fg9C01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 39.0 | 3.85e-01 | 94.7% | 72.9% |
| 2chrA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.52 | 47.0 | 4.11e-01 | 100.0% | 93.1% |
| 2b3yA05 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.52 | 46.0 | 3.82e-01 | 97.7% | 89.8% |
| 1q14A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.52 | 44.0 | 3.97e-01 | 93.1% | 69.4% |
| 4p63D00 | 3.40.910.10 | Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase | 0.52 | 40.0 | 3.08e-01 | 82.4% | 72.1% |
| 2ht1A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.61e-01 | 90.1% | 65.3% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 46.0 | 3.49e-01 | 100.0% | 46.5% |
| 1xngA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 38.0 | 3.17e-01 | 80.2% | 89.9% |
| 2cb9A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 4.18e-01 | 100.0% | 90.8% |
| 1vp4A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 45.0 | 3.77e-01 | 100.0% | 65.9% |
| 4fypB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.50 | 44.0 | 3.74e-01 | 96.9% | 78.7% |
| 1f0iA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.50 | 45.0 | 3.87e-01 | 100.0% | 80.4% |
| 3av0A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.50 | 45.0 | 3.67e-01 | 100.0% | 90.4% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048003 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 71.0 | 5.13e-01 | 100.0% | 36.8% |
| 5045354 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 71.0 | 5.20e-01 | 100.0% | 40.3% |
| 4218255 | 328.3.1.1 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C | 0.74 | 50.0 | 5.87e-01 | 71.8% | 100.0% |
| 5048543 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 61.0 | 4.66e-01 | 88.5% | 53.2% |
| 5032689 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 61.0 | 4.73e-01 | 88.5% | 62.2% |
| 3668078 | 328.3.1.1 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C | 0.72 | 50.0 | 5.55e-01 | 74.8% | 88.6% |
| 4194495 | 328.3.1.1 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C | 0.72 | 49.0 | 5.67e-01 | 73.3% | 96.8% |
| 3557282 | 328.3.1.1 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C | 0.72 | 51.0 | 5.33e-01 | 74.0% | 79.2% |
| 3603630 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.72 | 65.0 | 4.68e-01 | 96.9% | 44.9% |
| 5036135 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 66.0 | 4.88e-01 | 100.0% | 42.2% |
| 5051176 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 64.0 | 4.64e-01 | 96.9% | 45.4% |
| 3275807 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 66.0 | 4.80e-01 | 100.0% | 40.9% |
| 4942058 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 66.0 | 4.46e-01 | 100.0% | 73.1% |
| 4935176 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 66.0 | 4.73e-01 | 100.0% | 39.1% |
| 3533544 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 65.0 | 4.75e-01 | 100.0% | 39.1% |
| 5065371 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 64.0 | 4.53e-01 | 100.0% | 44.2% |
| 4942889 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 64.0 | 5.06e-01 | 100.0% | 55.7% |
| 4022229 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.68 | 49.0 | 5.29e-01 | 74.8% | 88.2% |
| 5033665 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 63.0 | 4.78e-01 | 100.0% | 49.2% |
| 4963770 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 58.0 | 4.18e-01 | 91.6% | 63.3% |
| 5032582 | 2002.1.2.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 | 0.68 | 62.0 | 5.67e-01 | 100.0% | 91.9% |
| 3959015 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 44.0 | 4.78e-01 | 90.8% | 78.2% |
| 4972341 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 61.0 | 4.75e-01 | 100.0% | 56.2% |
| 4941301 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 58.0 | 4.33e-01 | 92.4% | 56.6% |
| 3267514 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.67 | 47.0 | 5.11e-01 | 73.3% | 95.5% |
| 4939087 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.66 | 57.0 | 4.63e-01 | 92.4% | 87.1% |
| 4999400 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.66 | 61.0 | 4.60e-01 | 98.5% | 51.9% |
| 3992823 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.66 | 39.0 | 3.45e-01 | 74.0% | 40.0% |
| 4228869 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.65 | 60.0 | 4.63e-01 | 100.0% | 58.6% |
| 4564319 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.65 | 60.0 | 4.35e-01 | 100.0% | 47.0% |
| 5021448 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 38.0 | 3.65e-01 | 77.1% | 48.4% |
| 3800922 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.65 | 40.0 | 3.85e-01 | 78.6% | 51.6% |
| 4976743 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 51.0 | 4.61e-01 | 97.7% | 61.7% |
| 4970466 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 57.0 | 4.20e-01 | 100.0% | 71.1% |
| 4988169 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 58.0 | 4.14e-01 | 100.0% | 43.9% |
| 4254672 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.63 | 57.0 | 4.08e-01 | 97.7% | 73.0% |
| 4948884 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 59.0 | 4.39e-01 | 100.0% | 53.4% |
| 4993590 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 57.0 | 4.02e-01 | 98.5% | 47.4% |
| 3626019 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.63 | 57.0 | 4.27e-01 | 100.0% | 72.0% |
| 5083425 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 57.0 | 4.50e-01 | 100.0% | 51.5% |
| 5027493 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 57.0 | 4.35e-01 | 100.0% | 46.3% |
| 3689076 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.62 | 57.0 | 4.19e-01 | 100.0% | 72.5% |
| 3774119 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.62 | 57.0 | 4.22e-01 | 100.0% | 70.7% |
| 3520725 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.62 | 57.0 | 4.25e-01 | 100.0% | 74.2% |
| 3709563 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 53.0 | 4.48e-01 | 91.6% | 98.6% |
| 4973038 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 56.0 | 4.81e-01 | 98.5% | 72.2% |
| 3196562 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 52.0 | 4.83e-01 | 96.9% | 72.1% |
| 4504560 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.61 | 55.0 | 4.16e-01 | 97.7% | 71.0% |
| 4428247 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.61 | 55.0 | 4.11e-01 | 100.0% | 74.6% |
| 4426253 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.60 | 54.0 | 3.99e-01 | 97.7% | 69.1% |
| 4955396 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 55.0 | 4.34e-01 | 100.0% | 67.9% |
| 4163747 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.59 | 53.0 | 4.78e-01 | 100.0% | 94.1% |
| 4285993 | 2004.1.1.125 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N | 0.59 | 39.0 | 3.78e-01 | 90.1% | 58.7% |
| 4962796 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.58 | 48.0 | 3.57e-01 | 89.3% | 89.3% |
| 3879317 | 2003.1.1.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ISPD_C | 0.58 | 49.0 | 4.60e-01 | 92.4% | 99.4% |
| 3248974 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.58 | 51.0 | 3.93e-01 | 100.0% | 80.9% |
| 5063397 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.57 | 50.0 | 3.81e-01 | 100.0% | 78.4% |
| 4997827 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.57 | 49.0 | 4.13e-01 | 93.9% | 99.5% |
| 4819834 | 2004.1.1.171 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Smg8_Smg9 | 0.57 | 49.0 | 4.15e-01 | 93.9% | 82.8% |
| 5041491 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 40.0 | 3.81e-01 | 75.6% | 70.3% |
| 3192419 | 2484.1.1.114 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C | 0.55 | 46.0 | 3.82e-01 | 93.1% | 75.8% |
| 5003111 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.55 | 49.0 | 4.17e-01 | 99.2% | 97.7% |
| 4984818 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.54 | 48.0 | 4.24e-01 | 100.0% | 97.0% |
| 3976110 | 2004.1.1.641 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF6079 | 0.54 | 44.0 | 3.41e-01 | 88.5% | 60.0% |
| 5037488 | 2007.1.11.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains › Fucose_iso_N1 | 0.54 | 48.0 | 4.42e-01 | 100.0% | 95.9% |
| 4647060 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.53 | 48.0 | 3.91e-01 | 100.0% | 86.3% |
| 4141736 | 7579.1.1.47 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE | 0.53 | 48.0 | 3.50e-01 | 100.0% | 83.0% |
| 3911093 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 3.44e-01 | 90.8% | 45.9% |
| 4022865 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 45.0 | 3.77e-01 | 93.9% | 80.3% |
| 3733008 | 2484.1.1.114 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C | 0.52 | 44.0 | 3.40e-01 | 94.7% | 59.1% |
| 3753230 | 2004.1.1.139 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Torsin | 0.52 | 44.0 | 3.46e-01 | 92.4% | 68.9% |
| 4582525 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.52 | 41.0 | 3.38e-01 | 83.2% | 49.4% |
| 4411984 | 2484.1.1.114 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C | 0.52 | 46.0 | 4.14e-01 | 97.7% | 97.2% |
| 5068507 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.52 | 46.0 | 4.02e-01 | 100.0% | 93.5% |
| 3234636 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.51 | 46.0 | 4.04e-01 | 100.0% | 88.5% |
| None | — | 0.51 | 45.0 | 3.36e-01 | 97.7% | 44.6% | |
| 3929140 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 45.0 | 4.37e-01 | 95.4% | 95.2% |
| 3855523 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.51 | 46.0 | 4.03e-01 | 100.0% | 90.3% |
| 3359336 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.51 | 43.0 | 3.72e-01 | 94.7% | 95.8% |
| 3385150 | 7516.1.1.51 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_21 | 0.51 | 40.0 | 2.81e-01 | 85.5% | 27.0% |
D3
medium
residues 340-431