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pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00187
Bact-Virpig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00187
Identity
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pk1B00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.57 | 47.0 | 4.55e-01 | 100.0% | 82.9% |
| 7l1rG01 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.57 | 41.0 | 2.78e-01 | 75.0% | 98.6% |
| 4e6hA00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 44.0 | 2.52e-01 | 85.0% | 17.9% |
| 3kkcA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 39.0 | 2.84e-01 | 75.0% | 28.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4018573 | 611.7.1.10 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Helo_like_N | 0.56 | 44.0 | 3.06e-01 | 91.7% | 52.9% |
| 4961368 | 5051.1.1.2 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease | 0.53 | 45.0 | 2.73e-01 | 100.0% | 43.0% |
| 3835236 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.52 | 43.0 | 3.60e-01 | 96.7% | 94.8% |
D2
high
residues 121-189
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hpiA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.75 | 67.0 | 6.64e-01 | 100.0% | 94.4% |
| 2hnhA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.72 | 63.0 | 6.14e-01 | 100.0% | 94.9% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.64 | 55.0 | 5.43e-01 | 97.1% | 94.4% |
| 3ccgA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 51.0 | 3.84e-01 | 98.6% | 59.8% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.61 | 44.0 | 3.42e-01 | 78.3% | 77.1% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 51.0 | 4.90e-01 | 98.6% | 98.8% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 48.0 | 4.20e-01 | 95.7% | 67.8% |
| 4irlB02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.57 | 43.0 | 4.03e-01 | 95.7% | 63.4% |
| 2n7zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.57 | 43.0 | 3.85e-01 | 97.1% | 55.7% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 39.0 | 3.17e-01 | 81.2% | 53.1% |
| 3sk9A00 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.53 | 45.0 | 3.23e-01 | 100.0% | 53.5% |
| 7ahdC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 2.88e-01 | 89.9% | 29.0% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 38.0 | 3.51e-01 | 81.2% | 62.6% |
| 3g9gA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.51 | 35.0 | 2.52e-01 | 75.4% | 71.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1117589 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.75 | 67.0 | 4.25e-01 | 100.0% | 21.3% |
| 4064450 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.74 | 63.0 | 4.24e-01 | 100.0% | 24.8% |
| 3596811 | 3444.2.1.0 ↗ | alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain | 0.66 | 46.0 | 4.82e-01 | 73.9% | 100.0% |
| 5056724 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.65 | 54.0 | 3.46e-01 | 97.1% | 28.3% |
| 4148430 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.64 | 45.0 | 5.12e-01 | 81.2% | 100.0% |
| 4959112 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.64 | 46.0 | 3.17e-01 | 75.4% | 40.4% |
| 4324088 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.63 | 46.0 | 5.06e-01 | 81.2% | 94.5% |
| 2808778 | 3444.2.1.1 ↗ | alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain › XPC-binding | 0.61 | 43.0 | 4.58e-01 | 75.4% | 100.0% |
| 3455568 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.61 | 51.0 | 4.85e-01 | 89.9% | 97.5% |
| 3707772 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.61 | 46.0 | 4.61e-01 | 79.7% | 92.9% |
| 4152337 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 44.0 | 3.08e-01 | 79.7% | 41.7% |
| 3942135 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.58 | 45.0 | 3.08e-01 | 84.1% | 27.8% |
| 3057440 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.58 | 44.0 | 4.12e-01 | 95.7% | 65.6% |
| 4351992 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.56 | 42.0 | 2.51e-01 | 82.6% | 11.9% |
| 5029119 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.55 | 43.0 | 3.63e-01 | 87.0% | 65.0% |
| 4974183 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 41.0 | 2.80e-01 | 82.6% | 26.3% |
D3
medium
residues 88-119_192-246
Domain cluster:
rep: SR-VP_4-6_scaffold_141_5680703_prodigal-single.1__X__X__00441__D7-74
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07733.19 best | DNA_pol3_alpha | 33.8 | 4.10e-08 | 70.1% | 20.8% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m5q102 | 3.30.310.60 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Like-Sm ribonucleoprotein, C-terminal domain | 0.68 | 32.0 | 3.84e-01 | 93.1% | 65.5% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.54 | 42.0 | 2.76e-01 | 85.1% | 87.1% |
| 1uocB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 43.0 | 3.21e-01 | 92.0% | 84.3% |
| 1g57A00 | 3.90.870.10 | Alpha Beta › Alpha-Beta Complex › DHBP synthase › DHBP synthase | 0.53 | 46.0 | 3.53e-01 | 97.7% | 94.6% |
| 3fcdB00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 33.0 | 3.08e-01 | 100.0% | 46.2% |
| 1ye8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 46.0 | 3.68e-01 | 100.0% | 76.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4142452 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.84 | 78.0 | 5.45e-01 | 100.0% | 53.6% |
| 1117589 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.84 | 77.0 | 5.13e-01 | 100.0% | 48.9% |
| 3969389 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.83 | 77.0 | 5.28e-01 | 100.0% | 56.4% |
| 4660116 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.83 | 77.0 | 5.22e-01 | 100.0% | 55.4% |
| 4064450 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.82 | 76.0 | 5.21e-01 | 98.9% | 56.7% |
| 3606814 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.64 | 40.0 | 4.19e-01 | 98.9% | 70.5% |
| 3989498 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 37.0 | 3.95e-01 | 100.0% | 78.4% |
| 4975368 | 297.1.1.2 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › Sua5_yciO_yrdC | 0.55 | 46.0 | 3.65e-01 | 100.0% | 83.4% |
| 4525749 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.54 | 33.0 | 3.50e-01 | 100.0% | 67.5% |
| 5016199 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.53 | 27.0 | 2.36e-01 | 98.9% | 29.6% |
| 3786380 | 2484.1.1.45 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 | 0.53 | 42.0 | 3.07e-01 | 92.0% | 92.8% |
D4
medium
residues 248-285
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 58.0 | 4.70e-01 | 92.1% | 50.0% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 3.62e-01 | 84.2% | 23.3% |
| 1ultB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.69 | 48.0 | 2.74e-01 | 76.3% | 35.3% |
| 2pw4A00 | 1.10.3300.10 | Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain | 0.68 | 58.0 | 3.79e-01 | 100.0% | 23.5% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 4.38e-01 | 100.0% | 46.3% |
| 8dkrB01 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.68 | 50.0 | 3.05e-01 | 78.9% | 19.2% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 4.24e-01 | 92.1% | 54.9% |
| 1hbxA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.67 | 47.0 | 3.92e-01 | 76.3% | 80.3% |
| 1zkkB00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.66 | 49.0 | 3.17e-01 | 78.9% | 80.1% |
| 4yzrA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.66 | 46.0 | 2.63e-01 | 100.0% | 7.0% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 3.75e-01 | 92.1% | 48.5% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 56.0 | 4.18e-01 | 100.0% | 67.0% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 3.81e-01 | 92.1% | 49.5% |
| 3l4gC03 | 1.10.10.2330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 45.0 | 4.29e-01 | 89.5% | 62.3% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.63 | 47.0 | 3.46e-01 | 86.8% | 76.5% |
| 2b30A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.62 | 48.0 | 3.64e-01 | 94.7% | 91.7% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.62 | 45.0 | 3.93e-01 | 81.6% | 59.7% |
| 3s93A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.61 | 44.0 | 3.65e-01 | 81.6% | 43.8% |
| 3vkgA07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 52.0 | 2.99e-01 | 97.4% | 60.7% |
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.61 | 52.0 | 3.78e-01 | 100.0% | 71.2% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 3.41e-01 | 89.5% | 44.3% |
| 2pmzK00 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.61 | 46.0 | 3.63e-01 | 84.2% | 56.1% |
| 1qlmA01 | 3.10.340.11 | Alpha Beta › Roll › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 1 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 1 | 0.61 | 46.0 | 3.49e-01 | 100.0% | 33.1% |
| 5eupA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.61 | 45.0 | 3.07e-01 | 78.9% | 30.8% |
| 2xzn800 | 3.30.63.20 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › | 0.61 | 47.0 | 3.71e-01 | 94.7% | 75.3% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.60 | 48.0 | 3.04e-01 | 94.7% | 51.1% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.60 | 48.0 | 3.64e-01 | 97.4% | 92.5% |
| 1vx7X00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 45.0 | 3.51e-01 | 89.5% | 82.5% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 3.48e-01 | 94.7% | 33.3% |
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.29e-01 | 94.7% | 96.2% |
| 5m1pB00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.59 | 49.0 | 3.21e-01 | 100.0% | 30.7% |
| 2wa0A01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.59 | 46.0 | 3.37e-01 | 86.8% | 32.7% |
| 1xa3A01 | 3.40.50.10540 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 | 0.59 | 45.0 | 2.67e-01 | 84.2% | 10.8% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 3.79e-01 | 94.7% | 51.9% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.59 | 43.0 | 3.94e-01 | 84.2% | 56.9% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.59 | 45.0 | 2.65e-01 | 84.2% | 9.3% |
| 1i07A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 44.0 | 3.88e-01 | 84.2% | 66.1% |
| 3u5eU00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 43.0 | 3.31e-01 | 86.8% | 79.0% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 45.0 | 3.29e-01 | 97.4% | 50.0% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.58 | 45.0 | 3.05e-01 | 94.7% | 37.9% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.58 | 45.0 | 3.81e-01 | 89.5% | 57.6% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.58 | 42.0 | 3.71e-01 | 97.4% | 48.7% |
| 3tvkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 49.0 | 3.23e-01 | 100.0% | 44.2% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.57 | 43.0 | 3.11e-01 | 100.0% | 38.5% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.27e-01 | 89.5% | 34.0% |
| 2yfqB03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 46.0 | 3.11e-01 | 89.5% | 60.0% |
| 1nubA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 38.0 | 3.04e-01 | 71.1% | 68.3% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.57 | 44.0 | 3.40e-01 | 89.5% | 49.0% |
| 4oloB00 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.56 | 45.0 | 3.60e-01 | 94.7% | 44.0% |
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.56 | 39.0 | 3.67e-01 | 89.5% | 59.0% |
| 2w00A02 | 3.90.640.50 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.56 | 48.0 | 3.86e-01 | 97.4% | 91.8% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 2.85e-01 | 94.7% | 21.4% |
| 3e07A00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.56 | 42.0 | 3.33e-01 | 89.5% | 96.7% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.56 | 47.0 | 3.47e-01 | 97.4% | 45.0% |
| 2kyyA00 | 3.30.950.30 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain | 0.56 | 45.0 | 3.14e-01 | 100.0% | 75.8% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.55 | 42.0 | 3.24e-01 | 89.5% | 39.7% |
| 4flnA02 | 3.20.190.20 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › | 0.55 | 41.0 | 2.83e-01 | 81.6% | 57.2% |
| 1dctA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 43.0 | 2.95e-01 | 100.0% | 48.6% |
| 1fjrA02 | 2.170.180.11 | Mainly Beta › Beta Complex › Methuselah ectodomain, domain 2 › Methuselah ectodomain, domain 2 | 0.55 | 40.0 | 3.05e-01 | 94.7% | 64.8% |
| 6lw5A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 43.0 | 2.62e-01 | 100.0% | 48.7% |
| 2ganA02 | 6.20.300.10 | Special › Other non-globular › CbiD-like › | 0.55 | 37.0 | 3.74e-01 | 78.9% | 71.8% |
| 2r6fA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 41.0 | 3.59e-01 | 97.4% | 88.9% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.55 | 46.0 | 2.79e-01 | 100.0% | 62.6% |
| 1j7xA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 45.0 | 2.88e-01 | 97.4% | 31.8% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 48.0 | 3.81e-01 | 100.0% | 54.7% |
| 4nzrM01 | 3.30.1370.200 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 47.0 | 3.64e-01 | 100.0% | 72.6% |
| 3euhD01 | 1.10.10.2250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 40.0 | 3.39e-01 | 84.2% | 77.1% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 47.0 | 3.60e-01 | 100.0% | 98.8% |
| 1c7uA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.53 | 43.0 | 3.72e-01 | 94.7% | 71.4% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 46.0 | 3.48e-01 | 100.0% | 73.9% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.52 | 38.0 | 3.34e-01 | 81.6% | 45.1% |
| 2uvaG11 | 6.10.60.10 | Special › Helix non-globular › Hydrophobic Seed Protein › | 0.52 | 41.0 | 3.78e-01 | 94.7% | 81.8% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 39.0 | 3.41e-01 | 100.0% | 81.8% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 40.0 | 3.08e-01 | 92.1% | 34.7% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.51 | 37.0 | 3.36e-01 | 97.4% | 55.1% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 45.0 | 2.80e-01 | 97.4% | 33.2% |
| 2js3A01 | 1.10.287.780 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ITPase-like domains | 0.51 | 43.0 | 3.52e-01 | 100.0% | 64.5% |
| 1qr0A02 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.51 | 44.0 | 3.20e-01 | 97.4% | 44.7% |
| 1o75A02 | 2.30.30.470 | Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B | 0.51 | 42.0 | 3.00e-01 | 92.1% | 33.0% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 36.0 | 2.63e-01 | 94.7% | 56.7% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3937789 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.77 | 47.0 | 3.03e-01 | 86.8% | 13.9% |
| 3528137 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.74 | 61.0 | 3.93e-01 | 97.4% | 39.5% |
| 3178207 | 101.1.2.774 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30201 | 0.72 | 57.0 | 3.77e-01 | 94.7% | 22.9% |
| 3253833 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 56.0 | 4.73e-01 | 92.1% | 57.1% |
| 3223457 | 101.1.2.661 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD | 0.71 | 56.0 | 3.39e-01 | 92.1% | 15.0% |
| 3735563 | 101.1.2.267 ↗ | alpha arrays › HTH › HTH › winged helix domain › Nse4_C | 0.71 | 56.0 | 3.86e-01 | 94.7% | 27.3% |
| 3471467 | 101.1.2.169 ↗ | alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 | 0.71 | 57.0 | 4.20e-01 | 92.1% | 38.1% |
| 3735991 | 109.4.1.526 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc | 0.71 | 53.0 | 2.92e-01 | 84.2% | 6.5% |
| 3541293 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 52.0 | 4.08e-01 | 89.5% | 36.7% |
| 3743565 | 109.4.1.313 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UTP20_N | 0.70 | 48.0 | 2.82e-01 | 81.6% | 8.7% |
| 3219795 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.70 | 51.0 | 2.98e-01 | 78.9% | 45.5% |
| 3432156 | 386.1.1.117 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 | 0.70 | 57.0 | 5.21e-01 | 100.0% | 74.5% |
| 3325367 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.69 | 46.0 | 2.84e-01 | 86.8% | 11.8% |
| 3924514 | 109.4.1.83 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf | 0.69 | 47.0 | 2.78e-01 | 84.2% | 9.3% |
| 3966249 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.69 | 51.0 | 3.36e-01 | 78.9% | 67.7% |
| 3711612 | 1017.1.1.1 ↗ | a+b two layers › Rrs1 › Rrs1 › Rrs1 › RRS1 | 0.68 | 47.0 | 3.76e-01 | 73.7% | 57.3% |
| 4033043 | 616.1.1.41 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Terminase_4 | 0.68 | 48.0 | 3.62e-01 | 97.4% | 32.2% |
| 5053763 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 53.0 | 4.17e-01 | 94.7% | 50.0% |
| 3633123 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 48.0 | 3.42e-01 | 76.3% | 70.4% |
| 3919567 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.67 | 53.0 | 4.12e-01 | 94.7% | 61.1% |
| 3505845 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.66 | 50.0 | 3.87e-01 | 92.1% | 41.0% |
| 3599462 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.66 | 49.0 | 2.90e-01 | 86.8% | 10.5% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.66 | 48.0 | 2.83e-01 | 81.6% | 9.8% |
| 3982048 | 327.16.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › type_II_gspD_N0 | 0.66 | 50.0 | 4.60e-01 | 92.1% | 64.0% |
| 4933315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 48.0 | 4.06e-01 | 94.7% | 47.5% |
| 3261727 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.64 | 49.0 | 3.63e-01 | 89.5% | 56.5% |
| 3826145 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.64 | 49.0 | 3.02e-01 | 84.2% | 18.2% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 49.0 | 3.67e-01 | 84.2% | 48.9% |
| 3718200 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 48.0 | 3.33e-01 | 84.2% | 49.6% |
| 3229643 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 48.0 | 3.34e-01 | 84.2% | 93.3% |
| 5060418 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 48.0 | 3.33e-01 | 84.2% | 28.3% |
| 3487912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 44.0 | 3.51e-01 | 97.4% | 32.7% |
| 3364027 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.62 | 50.0 | 3.12e-01 | 89.5% | 19.1% |
| 3272300 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.62 | 47.0 | 2.74e-01 | 84.2% | 66.1% |
| 3630462 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 47.0 | 3.20e-01 | 84.2% | 61.4% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 47.0 | 3.33e-01 | 84.2% | 50.4% |
| 4972761 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 43.0 | 2.67e-01 | 76.3% | 44.5% |
| 4410759 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 45.0 | 3.16e-01 | 78.9% | 32.2% |
| 4011414 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.60 | 48.0 | 2.93e-01 | 86.8% | 20.9% |
| 3271850 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.60 | 46.0 | 2.64e-01 | 84.2% | 27.1% |
| 3705134 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.60 | 46.0 | 2.67e-01 | 86.8% | 19.7% |
| 3482761 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 43.0 | 2.54e-01 | 84.2% | 67.0% |
| 4945161 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.59 | 46.0 | 2.87e-01 | 84.2% | 52.1% |
| 5073006 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.59 | 50.0 | 3.35e-01 | 100.0% | 56.9% |
| 4995778 | 101.1.2.368 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_36 | 0.59 | 43.0 | 3.65e-01 | 94.7% | 47.1% |
| 3301960 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.59 | 46.0 | 2.81e-01 | 86.8% | 32.0% |
| 3670599 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.59 | 46.0 | 3.14e-01 | 86.8% | 49.6% |
| 5042330 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.59 | 46.0 | 3.81e-01 | 86.8% | 47.1% |
| 3981752 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.58 | 42.0 | 3.10e-01 | 89.5% | 26.2% |
| 4940198 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 3.34e-01 | 94.7% | 30.8% |
| 3711143 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 49.0 | 2.84e-01 | 100.0% | 24.5% |
| 4646939 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.58 | 45.0 | 2.79e-01 | 86.8% | 33.2% |
| 5050094 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.58 | 46.0 | 3.03e-01 | 89.5% | 50.6% |
| 3990267 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.58 | 50.0 | 3.12e-01 | 100.0% | 56.4% |
| 3900258 | 3169.1.1.1 ↗ | a+b two layers › Carboxyl terminal domain of human deltex 3-like › Carboxyl terminal domain of human deltex 3-like › Carboxyl terminal domain of human deltex 3-like › DTC | 0.58 | 45.0 | 3.20e-01 | 89.5% | 50.8% |
| 3576508 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.58 | 45.0 | 3.70e-01 | 86.8% | 72.9% |
| 4928803 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.58 | 50.0 | 3.90e-01 | 100.0% | 71.8% |
| 5029842 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.57 | 43.0 | 3.34e-01 | 94.7% | 34.3% |
| 3948330 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 48.0 | 3.47e-01 | 97.4% | 65.5% |
| 3683227 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.57 | 46.0 | 2.93e-01 | 97.4% | 60.0% |
| 3738814 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.56 | 43.0 | 2.60e-01 | 92.1% | 72.8% |
| 3610966 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 42.0 | 2.56e-01 | 89.5% | 67.9% |
| 4879386 | 101.1.2.93 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Mga | 0.55 | 42.0 | 3.52e-01 | 92.1% | 51.3% |
| 3589866 | 101.1.2.66 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mga | 0.55 | 44.0 | 3.57e-01 | 97.4% | 44.7% |
| 3939311 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.55 | 49.0 | 3.51e-01 | 100.0% | 96.4% |
| 3517280 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.55 | 45.0 | 2.63e-01 | 94.7% | 52.6% |
| 3608755 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.55 | 43.0 | 3.51e-01 | 100.0% | 56.5% |
| 3403813 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.55 | 46.0 | 2.70e-01 | 100.0% | 34.3% |
| 3456703 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.55 | 40.0 | 3.84e-01 | 81.6% | 88.9% |
| 5076133 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.54 | 48.0 | 3.79e-01 | 100.0% | 57.5% |
| 3512942 | 355.1.1.0 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like | 0.54 | 40.0 | 4.11e-01 | 78.9% | 88.6% |
| 1407164 | 2484.1.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin,Thymosin | 0.54 | 48.0 | 2.98e-01 | 100.0% | 31.1% |
| 3686916 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.54 | 47.0 | 2.93e-01 | 100.0% | 33.5% |
| 4922053 | 5093.1.1.4 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly, Fibritin_C | 0.53 | 43.0 | 2.50e-01 | 100.0% | 14.7% |
| 3699192 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.53 | 45.0 | 2.74e-01 | 100.0% | 25.3% |
| 4279139 | 3819.2.1.1 ↗ | alpha complex topology › CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › Csx12 | 0.52 | 46.0 | 2.49e-01 | 100.0% | 42.4% |
| 3784236 | 807.1.1.0 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) | 0.52 | 46.0 | 3.30e-01 | 100.0% | 47.3% |
| 3726808 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.52 | 46.0 | 2.99e-01 | 100.0% | 90.0% |
| 3661638 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.52 | 45.0 | 3.38e-01 | 100.0% | 58.9% |
| 3931636 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.51 | 41.0 | 3.66e-01 | 97.4% | 65.0% |
| 3714022 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.51 | 37.0 | 3.45e-01 | 97.4% | 60.0% |
| 3587733 | 4980.1.1.0 ↗ | alpha superhelices › Middle domain of Hypothetical protein MPN330 › Middle domain of Hypothetical protein MPN330 › Middle domain of Hypothetical protein MPN330 | 0.51 | 42.0 | 3.27e-01 | 97.4% | 65.6% |
| 3425666 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.51 | 39.0 | 2.85e-01 | 97.4% | 30.4% |
| 3781870 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.51 | 44.0 | 3.40e-01 | 100.0% | 58.8% |
| 4944834 | 3625.1.1.0 ↗ | alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain | 0.50 | 43.0 | 3.04e-01 | 94.7% | 33.6% |