←Back to structures
pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00194
Bact-Virpig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00194
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 227-399
Domain cluster:
representative
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946140 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.80 | 76.0 | 5.91e-01 | 100.0% | 55.9% |
| 4969968 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.80 | 76.0 | 6.15e-01 | 100.0% | 64.3% |
| 4950296 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.78 | 74.0 | 6.06e-01 | 100.0% | 64.1% |
| 1828359 | 4333.1.1.4 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.77 | 73.0 | 6.06e-01 | 100.0% | 62.2% |
| 5019577 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.76 | 72.0 | 5.73e-01 | 100.0% | 61.8% |
| 4276327 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.76 | 72.0 | 6.19e-01 | 100.0% | 69.4% |
| 2785021 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.76 | 71.0 | 6.11e-01 | 100.0% | 69.7% |
| 4932256 | 4333.1.1.6 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › M_Eco57I_C | 0.75 | 71.0 | 5.90e-01 | 100.0% | 69.3% |
| 4964254 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.74 | 70.0 | 5.99e-01 | 100.0% | 72.7% |
| 5001065 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.74 | 69.0 | 5.55e-01 | 100.0% | 63.1% |
| 4079871 | 4333.1.1.6 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › M_Eco57I_C | 0.74 | 70.0 | 5.85e-01 | 100.0% | 65.8% |
| 4586572 | 4333.1.1.6 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › M_Eco57I_C | 0.72 | 67.0 | 5.88e-01 | 100.0% | 71.2% |
| 4395672 | 4333.1.1.6 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › M_Eco57I_C | 0.70 | 66.0 | 6.37e-01 | 100.0% | 92.6% |
| 5004387 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.66 | 40.0 | 4.04e-01 | 100.0% | 57.8% |
| 3988809 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.64 | 49.0 | 4.79e-01 | 100.0% | 73.9% |
| 3838956 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.64 | 40.0 | 4.28e-01 | 100.0% | 71.3% |
| 3839878 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.63 | 42.0 | 3.91e-01 | 100.0% | 53.5% |
| 3165015 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.56 | 40.0 | 4.23e-01 | 100.0% | 81.3% |
| 5038524 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.54 | 38.0 | 3.57e-01 | 100.0% | 60.0% |
D2
medium
residues 1-138
Domain cluster:
rep: IMGVR_UViG_3300033153_012907-3300033153-Ga0366824_102808127__D27-122_188-212
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07669.18 best | Eco57I | 67.2 | 2.70e-18 | 87.7% | 48.2% |
| PF02384.23 | N6_Mtase | 20.8 | 3.00e-04 | 52.2% | 13.5% |
D3
medium
residues 139-212
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g38A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.83 | 78.0 | 5.36e-01 | 100.0% | 35.9% |
| 3viuA04 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.56 | 49.0 | 3.77e-01 | 100.0% | 87.3% |
| 5f1cA02 | 2.60.490.10 | Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain | 0.55 | 41.0 | 2.81e-01 | 81.1% | 34.2% |
| 2fb5A02 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.53 | 42.0 | 3.57e-01 | 90.5% | 100.0% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 36.0 | 3.12e-01 | 73.0% | 91.6% |
| 1yt3A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 41.0 | 3.12e-01 | 90.5% | 50.0% |
| 4fqdB02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.51 | 35.0 | 2.58e-01 | 100.0% | 24.5% |
| 7bvaA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 38.0 | 2.73e-01 | 79.7% | 50.4% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 30.0 | 3.19e-01 | 100.0% | 65.2% |
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.51 | 42.0 | 3.40e-01 | 94.6% | 92.7% |
| 2p2eA00 | 2.60.300.12 | Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain | 0.50 | 36.0 | 3.14e-01 | 77.0% | 64.7% |
| 5ywwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.29e-01 | 100.0% | 86.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005190 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.84 | 78.0 | 4.88e-01 | 100.0% | 25.2% |
| 4944512 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.83 | 76.0 | 4.85e-01 | 100.0% | 23.0% |
| 4585057 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.83 | 78.0 | 5.26e-01 | 100.0% | 33.3% |
| 3987620 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.82 | 75.0 | 4.79e-01 | 100.0% | 36.0% |
| 4968431 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.81 | 75.0 | 5.04e-01 | 100.0% | 32.5% |
| None | — | 0.80 | 73.0 | 4.72e-01 | 100.0% | 37.8% | |
| 3166401 | 2003.1.5.160 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase, Eco57I | 0.80 | 72.0 | 4.98e-01 | 100.0% | 37.5% |
| 3957880 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.80 | 73.0 | 4.97e-01 | 100.0% | 34.7% |
| 3839822 | 2003.1.5.160 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase, Eco57I | 0.79 | 69.0 | 4.69e-01 | 95.9% | 28.5% |
| 4997131 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.79 | 72.0 | 4.71e-01 | 100.0% | 34.9% |
| 4943682 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.78 | 71.0 | 4.89e-01 | 100.0% | 42.5% |
| 4269760 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.77 | 69.0 | 4.51e-01 | 100.0% | 25.3% |
| 4024861 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.65 | 57.0 | 3.89e-01 | 100.0% | 28.7% |
| 3938460 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.64 | 56.0 | 3.93e-01 | 100.0% | 32.0% |
| 3447730 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.63 | 54.0 | 3.69e-01 | 95.9% | 30.5% |
| 4382081 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.59 | 52.0 | 3.92e-01 | 100.0% | 86.2% |
| 4947590 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.58 | 51.0 | 3.90e-01 | 100.0% | 87.8% |
| 4524184 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.57 | 49.0 | 3.89e-01 | 100.0% | 86.6% |
| 4994994 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.57 | 49.0 | 3.81e-01 | 100.0% | 85.1% |
| 4930980 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.57 | 49.0 | 3.88e-01 | 100.0% | 89.1% |
| 4974695 | 304.111.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like | 0.55 | 49.0 | 3.77e-01 | 100.0% | 87.1% |
| 4204114 | 304.111.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like | 0.55 | 49.0 | 3.82e-01 | 100.0% | 87.1% |
| 4950991 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.55 | 48.0 | 3.77e-01 | 100.0% | 90.3% |
| 4477565 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.55 | 47.0 | 3.77e-01 | 100.0% | 91.9% |
| 5030194 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.54 | 38.0 | 3.42e-01 | 90.5% | 50.9% |
| 3573875 | 221.1.1.58 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CRIM | 0.53 | 37.0 | 3.20e-01 | 75.7% | 70.8% |
| 2793306 | 4279.1.1.1 ↗ | a+b three layers › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DAC | 0.51 | 42.0 | 3.45e-01 | 97.3% | 91.8% |
| 3950006 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.51 | 36.0 | 3.30e-01 | 77.0% | 62.0% |
| 3589515 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.51 | 37.0 | 3.26e-01 | 77.0% | 67.3% |
| 3296466 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.50 | 35.0 | 3.32e-01 | 89.2% | 57.0% |