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pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00275

Bact-Vir

pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00275

Identity

Kingdom:
phage

Quality

80.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-98
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6nvxB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.60 35.0 3.44e-01 95.6% 51.9%
4bz4A00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.51e-01 98.5% 79.4%
5l77A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 45.0 3.74e-01 100.0% 52.6%
7nitA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 44.0 3.43e-01 100.0% 61.0%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 39.0 2.70e-01 85.3% 57.4%
2dmkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 3.88e-01 100.0% 74.8%
2cuiA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 43.0 3.73e-01 100.0% 67.9%
2ztbA02 2.60.40.4280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 41.0 3.69e-01 94.1% 85.9%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3223928 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.61 53.0 4.97e-01 100.0% 84.7%
3600188 3529.1.1.0 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain 0.61 44.0 4.76e-01 100.0% 96.4%
3662095 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.59 49.0 3.72e-01 100.0% 63.2%
3606398 3529.1.1.1 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault 0.57 42.0 4.50e-01 98.5% 96.4%
3714918 3529.1.1.1 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault 0.57 42.0 4.58e-01 100.0% 98.2%
3869063 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 46.0 4.20e-01 100.0% 69.5%
3261165 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 3.95e-01 100.0% 74.2%
3685116 10.32.1.86 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C_2 0.54 46.0 3.50e-01 100.0% 72.8%
3249488 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 4.06e-01 100.0% 80.0%
3748151 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.51 44.0 3.49e-01 100.0% 46.0%
4197366 10.32.1.265 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29487 0.51 44.0 3.29e-01 100.0% 49.7%
3696482 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 43.0 3.91e-01 97.1% 70.8%
3894257 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.56e-01 100.0% 52.6%
3519566 10.32.1.230 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.50 43.0 3.52e-01 100.0% 60.7%
3576210 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.50 43.0 3.66e-01 100.0% 70.0%
D2 high residues 102-229
PDB
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7vhqU01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.82 64.0 6.87e-01 100.0% 94.5%
1winA01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.80 66.0 6.92e-01 100.0% 95.7%
2rpbA00 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.79 61.0 6.43e-01 100.0% 91.2%
2zuoA10 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.78 66.0 7.00e-01 100.0% 99.1%
1a8rA02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.70 47.0 4.61e-01 100.0% 63.2%
4f8bA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.69 44.0 4.33e-01 99.2% 59.0%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.67 41.0 4.92e-01 76.6% 91.8%
6pmiF01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.66 40.0 4.98e-01 76.6% 97.5%
2z3xA00 6.10.10.80 Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like 0.62 29.0 4.05e-01 71.9% 98.2%
6ldiF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 4.47e-01 83.6% 95.8%
2irmA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.54 44.0 3.27e-01 100.0% 33.6%
1bcoA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 44.0 3.69e-01 91.4% 87.8%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944186 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.92 77.0 7.49e-01 100.0% 80.0%
4947843 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.88 73.0 7.44e-01 100.0% 88.0%
3333427 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.88 68.0 5.98e-01 100.0% 57.2%
3700069 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.88 68.0 7.19e-01 100.0% 89.6%
3355174 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.88 68.0 7.05e-01 100.0% 85.8%
3271328 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 67.0 7.33e-01 100.0% 96.2%
3959591 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.87 67.0 7.08e-01 100.0% 88.7%
4979692 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 75.0 7.47e-01 100.0% 87.7%
3597939 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.87 67.0 6.74e-01 100.0% 79.2%
5010097 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 71.0 7.53e-01 100.0% 95.7%
5001545 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 66.0 6.51e-01 99.2% 74.8%
3700023 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 68.0 7.00e-01 100.0% 86.7%
4995673 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 66.0 6.89e-01 100.0% 85.0%
5069131 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 66.0 6.65e-01 100.0% 78.5%
4932838 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 66.0 6.85e-01 100.0% 85.0%
3312228 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 68.0 6.68e-01 100.0% 77.8%
3599340 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.86 68.0 6.67e-01 100.0% 77.8%
4946531 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.86 70.0 7.17e-01 100.0% 88.0%
3602552 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 66.0 6.12e-01 100.0% 65.8%
3974085 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 66.0 6.78e-01 100.0% 85.0%
3269095 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 64.0 6.54e-01 98.4% 80.0%
3732337 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 65.0 6.54e-01 100.0% 78.5%
5050182 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 70.0 6.08e-01 100.0% 59.5%
3260338 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 65.0 6.64e-01 100.0% 81.6%
3605179 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 67.0 6.14e-01 100.0% 64.2%
5028381 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 68.0 6.65e-01 100.0% 78.5%
5054379 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 65.0 6.51e-01 100.0% 78.5%
3523996 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 65.0 6.85e-01 100.0% 88.7%
5058702 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.85 73.0 7.21e-01 100.0% 85.9%
5012808 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 70.0 6.56e-01 100.0% 73.3%
4944893 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.84 70.0 6.97e-01 100.0% 84.6%
5058343 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 68.0 6.93e-01 100.0% 86.4%
4970323 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 71.0 7.23e-01 100.0% 90.4%
3289226 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 70.0 7.35e-01 100.0% 96.5%
3500570 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 64.0 6.09e-01 100.0% 68.0%
4944483 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 64.0 6.44e-01 100.0% 78.5%
4941790 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 65.0 6.29e-01 100.0% 73.6%
3227676 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 64.0 5.92e-01 100.0% 63.7%
4977988 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 64.0 6.32e-01 100.0% 75.6%
3705042 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.83 53.0 6.47e-01 81.2% 96.5%
3569209 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 64.0 6.77e-01 100.0% 88.7%
4267962 230.5.1.5 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › FloA 0.83 62.0 6.29e-01 100.0% 78.4%
3253337 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 63.0 6.65e-01 100.0% 88.7%
3883427 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 64.0 5.81e-01 100.0% 62.4%
3496975 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.82 63.0 6.32e-01 100.0% 78.5%
3840749 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 63.0 6.67e-01 100.0% 88.7%
4991921 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 63.0 5.74e-01 100.0% 61.8%
4927252 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 64.0 6.33e-01 100.0% 77.8%
3237534 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 63.0 6.65e-01 100.0% 89.6%
3968735 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 65.0 6.76e-01 96.1% 90.0%
3482847 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.81 68.0 6.89e-01 100.0% 90.4%
3998793 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.80 67.0 6.20e-01 100.0% 70.6%
4009220 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.80 69.0 4.97e-01 100.0% 34.8%
4649099 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.80 63.0 5.96e-01 100.0% 70.0%
4025984 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.80 68.0 7.02e-01 99.2% 94.2%
4490995 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.80 67.0 5.18e-01 100.0% 42.6%
4965684 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.80 73.0 7.15e-01 100.0% 90.4%
3976795 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.80 69.0 6.79e-01 100.0% 86.7%
4670893 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.79 69.0 6.66e-01 100.0% 84.3%
3961248 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.79 69.0 6.25e-01 100.0% 71.5%
5059138 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.78 68.0 6.95e-01 100.0% 95.2%
3719141 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.77 67.0 5.11e-01 100.0% 43.8%
3728098 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 71.0 6.72e-01 100.0% 86.0%
3968703 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 64.0 6.36e-01 100.0% 85.9%
3595900 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 65.0 4.91e-01 100.0% 40.7%
3718698 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.76 65.0 4.85e-01 100.0% 39.3%
4956270 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 71.0 6.39e-01 100.0% 76.5%
4960853 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.74 65.0 6.32e-01 100.0% 86.4%
5060336 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.74 64.0 6.33e-01 98.4% 88.1%
3599357 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.74 66.0 6.80e-01 98.4% 100.0%
4996557 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 61.0 6.41e-01 100.0% 99.1%
3386432 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 69.0 6.24e-01 100.0% 77.6%
4681330 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.72 66.0 5.81e-01 100.0% 69.4%
3531258 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.71 66.0 6.49e-01 100.0% 93.3%
3501639 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.70 57.0 5.71e-01 100.0% 85.4%
4681344 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.65 59.0 5.54e-01 100.0% 82.6%
3993981 304.48.1.3 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.54 47.0 3.96e-01 96.9% 87.1%
D3 medium residues 279-328
PDB
Domain cluster: representative