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pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00027
Bact-Virpig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00027
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-148
Domain cluster:
rep: IMGVR_UViG_3300026204_000269-3300026204-Ga0208521_10070137__D4-135
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f55A01 | 1.10.10.2520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cell wall hydrolase SleB, domain 1 | 0.58 | 25.0 | 3.22e-01 | 71.7% | 67.5% |
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.54 | 28.0 | 3.43e-01 | 91.7% | 78.7% |
| 7wd3A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 29.0 | 3.72e-01 | 71.7% | 95.1% |
D2
high
residues 162-248_268-295
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lwxA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.54 | 36.0 | 4.09e-01 | 91.3% | 88.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184827 | 3361.1.1.1 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › RAC_head | 0.54 | 36.0 | 4.09e-01 | 91.3% | 88.6% |
| 3861849 | 601.1.1.7 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Talin_IBS2B | 0.53 | 39.0 | 2.86e-01 | 78.3% | 89.7% |