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pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00058
Bact-Virpig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00058
Identity
- Kingdom:
- phage
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-51
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cq2A02 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 41.0 | 3.97e-01 | 94.9% | 55.8% |
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.61 | 39.0 | 3.56e-01 | 97.4% | 41.8% |
| 4gu4A01 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.60 | 44.0 | 4.40e-01 | 97.4% | 79.1% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.58 | 38.0 | 3.12e-01 | 82.1% | 34.7% |
| 2kknA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 42.0 | 2.93e-01 | 89.7% | 45.9% |
| 3s93A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.56 | 37.0 | 3.08e-01 | 100.0% | 32.5% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.55 | 41.0 | 2.86e-01 | 84.6% | 77.7% |
| 5m99A02 | 3.90.400.10 | Alpha Beta › Alpha-Beta Complex › Oligo-1,6-glucosidase; domain 2 › Oligo-1,6-glucosidase; Domain 2 | 0.55 | 36.0 | 3.21e-01 | 100.0% | 35.4% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 38.0 | 2.91e-01 | 87.2% | 34.3% |
| 4yg6B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 2.70e-01 | 100.0% | 69.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1509718 | 325.1.8.5 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › CSL4_N | 0.69 | 45.0 | 3.78e-01 | 94.9% | 36.8% |
| 3251511 | 391.1.2.8 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Dicty_CTDC | 0.63 | 42.0 | 3.20e-01 | 71.8% | 27.0% |
| 3490755 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.58 | 47.0 | 4.69e-01 | 100.0% | 90.0% |
| 3263180 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 43.0 | 3.22e-01 | 84.6% | 30.9% |
| 3268126 | 351.1.1.0 ↗ | few secondary structure elements › Leech antihemostatic protein › Leech antihemostatic protein › Leech antihemostatic protein | 0.57 | 39.0 | 3.71e-01 | 74.4% | 59.2% |
| 3839042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 44.0 | 4.22e-01 | 87.2% | 75.6% |
| 3681793 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 43.0 | 3.97e-01 | 100.0% | 65.0% |
| 3204055 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.53 | 41.0 | 3.54e-01 | 87.2% | 81.5% |
| 3294867 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.52 | 42.0 | 3.27e-01 | 100.0% | 40.0% |
| 3903607 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.52 | 41.0 | 3.59e-01 | 89.7% | 80.0% |
| 4029417 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 37.0 | 2.27e-01 | 84.6% | 25.4% |
| 3232445 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 34.0 | 3.16e-01 | 84.6% | 48.3% |
| 4422251 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.50 | 37.0 | 3.46e-01 | 82.1% | 64.0% |
D2
medium
residues 136-263
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l5jA01 | 1.25.40.310 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Aconitate B, HEAT-like domain | 0.59 | 39.0 | 3.63e-01 | 89.1% | 53.4% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.53 | 23.0 | 2.66e-01 | 77.3% | 52.7% |
| 8gpvA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.53 | 41.0 | 4.09e-01 | 92.2% | 79.8% |
| 3k49A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 41.0 | 3.07e-01 | 93.0% | 30.6% |
| 1xd4A03 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.52 | 43.0 | 3.65e-01 | 93.0% | 58.3% |
| 4d8mA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.51 | 42.0 | 3.61e-01 | 90.6% | 93.5% |
| 3sqiA02 | 1.10.443.20 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 | 0.51 | 39.0 | 3.05e-01 | 81.2% | 73.3% |
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.50 | 43.0 | 4.23e-01 | 95.3% | 96.5% |
| 6tblB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.50 | 39.0 | 4.15e-01 | 89.1% | 96.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4464029 | 5000.6.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › Tethering factor for nuclear proteasome cut8 › Tethering factor for nuclear proteasome cut8 › Cut8 | 0.57 | 49.0 | 4.11e-01 | 92.2% | 55.8% |
| 3353652 | 109.4.1.94 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANTH | 0.57 | 50.0 | 4.34e-01 | 97.7% | 66.5% |
| 3588846 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.55 | 47.0 | 3.78e-01 | 94.5% | 96.1% |
| 3258094 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.54 | 48.0 | 3.63e-01 | 100.0% | 61.2% |
| 3612166 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 3.01e-01 | 94.5% | 32.8% |
| 4927476 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 42.0 | 4.10e-01 | 89.8% | 97.9% |
| 3274611 | 109.4.1.394 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMC1_C | 0.51 | 41.0 | 3.10e-01 | 90.6% | 35.2% |
| 3969040 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.51 | 45.0 | 3.68e-01 | 99.2% | 98.4% |
| 3665093 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.50 | 44.0 | 3.16e-01 | 98.4% | 49.2% |