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pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00130
Bact-Virpig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00130
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-103
Domain cluster:
rep: Salt_Pond_R1_B_D2_MG_scaffold_4_prodigal-single.1__X__X__00143__D11-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00166.27 best | Cpn10 | 26.1 | 9.90e-06 | 97.8% | 61.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.81 | 72.0 | 7.03e-01 | 100.0% | 87.8% |
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.77 | 68.0 | 6.59e-01 | 100.0% | 85.0% |
| 1g31A00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.67 | 61.0 | 5.81e-01 | 100.0% | 88.8% |
| 1xovA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 30.0 | 3.42e-01 | 76.9% | 74.2% |
| 5gj7A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.51 | 36.0 | 3.65e-01 | 98.9% | 73.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3674955 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.90 | 63.0 | 6.69e-01 | 98.9% | 81.2% |
| 4173931 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.81 | 72.0 | 7.11e-01 | 100.0% | 89.5% |
| 4082853 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.80 | 70.0 | 6.97e-01 | 100.0% | 89.4% |
| 3359945 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.78 | 64.0 | 6.27e-01 | 100.0% | 81.4% |
| 3175923 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.77 | 69.0 | 6.64e-01 | 100.0% | 86.0% |
| 4029028 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.76 | 69.0 | 6.64e-01 | 100.0% | 86.0% |
| 3508217 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.75 | 71.0 | 6.60e-01 | 100.0% | 88.2% |
| 3591216 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 36.0 | 3.76e-01 | 100.0% | 71.8% |
| 5000226 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.54 | 37.0 | 3.67e-01 | 100.0% | 68.4% |
| 3965563 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.51 | 37.0 | 3.56e-01 | 100.0% | 64.5% |
| 3989970 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 31.0 | 3.55e-01 | 73.6% | 84.6% |
| 3229739 | 872.4.1.0 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like | 0.50 | 26.0 | 3.24e-01 | 91.2% | 86.0% |