Back to structures

pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00138

Bact-Vir

pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00138

Identity

Kingdom:
phage

Quality

82.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-123
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 30.0 4.04e-01 73.3% 78.0%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.66 36.0 4.15e-01 95.7% 72.6%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.66 45.0 4.24e-01 70.7% 63.2%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.63 34.0 4.42e-01 82.8% 96.8%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.62 53.0 3.91e-01 92.2% 86.4%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.61 45.0 4.10e-01 75.9% 65.6%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.61 41.0 4.28e-01 93.1% 74.8%
3lmlA03 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 33.0 3.83e-01 85.3% 71.8%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.60 42.0 4.08e-01 70.7% 93.0%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 44.0 3.94e-01 78.4% 62.4%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 42.0 3.69e-01 75.9% 92.9%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.58 44.0 4.65e-01 89.7% 89.2%
5eo6B00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.56 48.0 3.59e-01 95.7% 70.4%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.55 41.0 3.92e-01 79.3% 80.7%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 46.0 3.47e-01 92.2% 88.3%
4g59C02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.54 37.0 3.30e-01 89.7% 51.3%
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.54 41.0 3.66e-01 81.9% 68.6%
6nu7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 42.0 3.12e-01 87.1% 66.7%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 47.0 4.41e-01 100.0% 83.6%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 46.0 3.57e-01 100.0% 93.9%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 31.0 3.76e-01 81.9% 100.0%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 40.0 3.71e-01 81.9% 77.9%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 32.0 3.45e-01 100.0% 74.2%
3ndaA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 42.0 4.08e-01 88.8% 93.2%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.86e-01 98.3% 69.6%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 31.0 3.65e-01 85.3% 100.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3597443 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.67 50.0 4.60e-01 78.4% 65.3%
5077178 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.64 43.0 4.84e-01 95.7% 88.9%
5034702 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 44.0 4.11e-01 72.4% 61.7%
4953273 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.62 44.0 4.11e-01 72.4% 61.4%
3620679 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.62 56.0 4.79e-01 100.0% 95.7%
4001272 3561.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.61 55.0 3.65e-01 100.0% 36.6%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 45.0 4.22e-01 77.6% 67.6%
3990496 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.60 34.0 4.30e-01 89.7% 92.9%
3820010 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.60 44.0 4.02e-01 77.6% 63.1%
3303563 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.60 45.0 4.06e-01 78.4% 64.4%
4974235 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.59 42.0 3.76e-01 73.3% 62.4%
3163979 71.1.1.4 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.59 43.0 3.70e-01 76.7% 91.1%
3295586 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.59 44.0 3.96e-01 79.3% 60.0%
4024970 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 41.0 2.84e-01 75.0% 42.6%
3607605 2008.6.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains 0.58 52.0 4.28e-01 100.0% 87.0%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 38.0 3.76e-01 73.3% 62.4%
1169937 71.1.1.4 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.58 42.0 3.66e-01 77.6% 91.5%
5041249 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 34.0 4.16e-01 70.7% 97.1%
None 0.57 45.0 2.73e-01 82.8% 62.1%
3246974 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 35.0 3.79e-01 82.8% 74.0%
4283763 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.56 47.0 3.56e-01 92.2% 88.4%
4461912 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.56 43.0 4.44e-01 96.6% 86.4%
3964749 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.55 39.0 3.46e-01 71.6% 95.0%
3169357 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.55 41.0 4.26e-01 90.5% 82.7%
3867103 3417.1.1.1 a+b three layers › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › BRICHOS 0.55 38.0 3.98e-01 70.7% 93.3%
4990953 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.54 41.0 4.03e-01 79.3% 79.8%
3584285 5.1.11.15 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DPPIV_N 0.53 43.0 3.01e-01 89.7% 44.3%
4944413 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.53 38.0 3.15e-01 74.1% 79.5%
4039230 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 33.0 3.91e-01 99.1% 97.3%
3949238 7579.1.1.34 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Tannase 0.52 44.0 2.91e-01 94.0% 33.1%
3928508 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 43.0 3.06e-01 89.7% 41.1%
4999620 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.52 40.0 3.87e-01 81.9% 79.2%
5009289 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.52 40.0 3.92e-01 81.9% 78.9%
3284774 321.1.1.11 a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › DUF2126 0.51 46.0 3.23e-01 100.0% 70.8%
4997289 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.51 39.0 3.84e-01 79.3% 76.4%
5029448 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 41.0 3.68e-01 86.2% 87.5%
3547737 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.51 44.0 3.02e-01 93.1% 51.4%
5044863 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.51 41.0 3.96e-01 87.9% 76.9%
4982195 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.50 42.0 4.03e-01 92.2% 78.5%
3241305 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.50 36.0 3.40e-01 73.3% 67.1%
D2 high residues 235-345_383-418
PDB
D3 high residues 422-506
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hl4A01 1.10.8.1310 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 55.0 4.64e-01 100.0% 51.4%
5ubvA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 41.0 4.45e-01 100.0% 88.7%
3bhgA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.54 43.0 3.98e-01 89.4% 70.4%
2bmoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.11e-01 82.4% 76.8%
4jzaA03 1.20.120.1720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.52 37.0 3.10e-01 75.3% 85.0%
4nleA01 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.51 37.0 2.75e-01 78.8% 33.6%
2fhzA00 3.30.190.30 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › 0.50 37.0 3.46e-01 78.8% 91.5%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945646 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.60 51.0 4.61e-01 94.1% 98.3%
4596909 604.12.1.59 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › UNC-50 0.58 44.0 3.32e-01 81.2% 64.8%
4032037 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 47.0 4.67e-01 100.0% 92.2%
3716320 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 44.0 4.02e-01 100.0% 77.6%
5021932 225.2.1.1 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 0.52 45.0 3.33e-01 100.0% 66.3%
4949868 225.2.1.1 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 0.51 45.0 3.28e-01 100.0% 65.2%
4838076 2007.1.19.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Acyl_transf_1 0.51 41.0 3.83e-01 89.4% 90.7%
D4 medium residues 143-201
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 61.0 6.32e-01 88.1% 76.8%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 61.0 5.87e-01 93.2% 66.7%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 56.0 6.29e-01 91.5% 88.9%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 59.0 6.29e-01 91.5% 86.3%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 65.0 6.77e-01 91.5% 90.9%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 55.0 5.68e-01 71.2% 82.1%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.80 60.0 4.92e-01 93.2% 46.5%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 54.0 5.51e-01 71.2% 77.6%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.79 57.0 4.27e-01 76.3% 87.2%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 56.0 3.75e-01 72.9% 22.8%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 60.0 6.23e-01 83.1% 100.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.60e-01 86.4% 77.8%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 4.95e-01 71.2% 61.3%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 5.03e-01 71.2% 65.7%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 5.11e-01 71.2% 70.1%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 5.12e-01 71.2% 70.1%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 51.0 5.95e-01 88.1% 100.0%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 4.98e-01 71.2% 77.3%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 53.0 5.89e-01 93.2% 100.0%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 5.61e-01 88.1% 86.0%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 5.12e-01 91.5% 66.7%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.05e-01 71.2% 73.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.74 56.0 4.29e-01 91.5% 37.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 4.46e-01 71.2% 52.9%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.49e-01 89.8% 79.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.74 52.0 4.02e-01 74.6% 37.4%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.72 53.0 5.08e-01 89.8% 67.6%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.72 53.0 4.01e-01 79.7% 64.1%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.72e-01 98.3% 84.7%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.56e-01 91.5% 87.0%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 53.0 4.68e-01 89.8% 55.3%
5douA01 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.71 59.0 4.27e-01 93.2% 69.6%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.71 52.0 5.35e-01 79.7% 100.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 5.06e-01 88.1% 73.0%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.69 54.0 3.70e-01 86.4% 58.5%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.13e-01 74.6% 58.5%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.13e-01 74.6% 55.1%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 51.0 5.07e-01 96.6% 82.0%
4fe7A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 51.0 4.29e-01 88.1% 81.7%
3w6vA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 52.0 4.30e-01 89.8% 82.9%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.65 44.0 4.92e-01 71.2% 100.0%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 5.04e-01 98.3% 73.6%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 5.04e-01 96.6% 77.6%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.65 47.0 5.11e-01 100.0% 100.0%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.85e-01 94.9% 75.8%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 49.0 3.69e-01 84.7% 55.5%
3oioA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 51.0 4.22e-01 89.8% 81.2%
3mn2A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 52.0 4.34e-01 93.2% 87.0%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.63 55.0 4.54e-01 100.0% 92.7%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 50.0 4.22e-01 89.8% 86.9%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 50.0 5.03e-01 89.8% 98.4%
2qm3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.21e-01 96.6% 57.8%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 45.0 4.62e-01 76.3% 89.1%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.38e-01 94.9% 63.0%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.61 45.0 4.34e-01 93.2% 71.6%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 3.81e-01 91.5% 44.8%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 54.0 4.11e-01 98.3% 54.5%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.04e-01 88.1% 57.6%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.57 47.0 3.90e-01 91.5% 57.5%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.22e-01 98.3% 63.1%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 48.0 3.62e-01 98.3% 68.9%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 4.39e-01 98.3% 76.4%
3i7aA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.54 42.0 2.84e-01 91.5% 49.5%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3927372 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 67.0 5.99e-01 78.0% 96.2%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.89 58.0 7.00e-01 86.4% 100.0%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.89 61.0 6.32e-01 88.1% 76.4%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 62.0 5.96e-01 91.5% 66.2%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 62.0 6.77e-01 91.5% 88.0%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 58.0 6.07e-01 88.1% 74.5%
3505559 101.1.6.19 alpha arrays › HTH › HTH › TrpR › PAX 0.86 62.0 5.63e-01 93.2% 58.7%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 60.0 6.53e-01 89.8% 86.0%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 61.0 5.92e-01 93.2% 67.7%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 61.0 6.11e-01 91.5% 73.3%
5034899 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.85 60.0 3.92e-01 72.9% 37.7%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 62.0 5.64e-01 89.8% 60.0%
5020331 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 59.0 5.72e-01 72.9% 73.8%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 60.0 6.76e-01 93.2% 97.8%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 62.0 6.48e-01 91.5% 83.6%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.84 58.0 6.52e-01 88.1% 95.6%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.84 60.0 5.97e-01 91.5% 73.3%
4008046 101.1.1.348 alpha arrays › HTH › HTH › Three-helical HTH › PF30461 0.83 57.0 6.14e-01 88.1% 84.0%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 60.0 5.84e-01 94.9% 69.2%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 59.0 6.13e-01 93.2% 80.0%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.83 58.0 6.48e-01 91.5% 95.6%
3946793 101.1.1.259 alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.82 60.0 4.70e-01 83.1% 39.1%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 58.0 6.48e-01 93.2% 97.8%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.82 54.0 6.38e-01 86.4% 100.0%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 57.0 5.43e-01 93.2% 62.9%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 65.0 6.08e-01 91.5% 70.4%
3640035 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 58.0 5.06e-01 93.2% 51.8%
5004840 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 63.0 5.63e-01 100.0% 61.3%
3283074 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 55.0 4.81e-01 71.2% 54.1%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 57.0 6.29e-01 98.3% 100.0%
3944331 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 54.0 4.87e-01 71.2% 57.5%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 54.0 5.60e-01 71.2% 85.5%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 58.0 5.84e-01 96.6% 76.7%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 60.0 6.23e-01 83.1% 100.0%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 55.0 4.96e-01 72.9% 59.5%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 57.0 5.69e-01 91.5% 75.0%
5025805 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 5.65e-01 72.9% 78.2%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 54.0 5.81e-01 91.5% 86.0%
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.78 57.0 6.13e-01 96.6% 92.0%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 53.0 5.16e-01 72.9% 72.3%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.76 54.0 5.59e-01 91.5% 80.0%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 53.0 4.80e-01 72.9% 58.7%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.76 54.0 4.74e-01 74.6% 56.5%
3452698 101.1.10.37 alpha arrays › HTH › HTH › Cyclin-like › PF26138 0.76 60.0 5.12e-01 86.4% 90.5%
3448782 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.76 61.0 5.12e-01 88.1% 90.0%
4998155 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 53.0 5.66e-01 72.9% 90.0%
3287536 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 53.0 5.96e-01 91.5% 97.8%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.75 55.0 5.36e-01 91.5% 70.8%
4977403 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 5.32e-01 74.6% 80.0%
3656429 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.74 61.0 4.19e-01 91.5% 68.3%
5028153 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 58.0 5.15e-01 84.7% 84.3%
3589364 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.73 60.0 4.46e-01 86.4% 92.6%
5061884 101.1.2.887 alpha arrays › HTH › HTH › winged helix domain › DUF1670 0.73 65.0 4.70e-01 98.3% 86.9%
3987630 101.1.1.260 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_ISL3 0.73 58.0 5.40e-01 83.1% 78.6%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.72 59.0 5.74e-01 98.3% 81.5%
4953237 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 49.0 5.09e-01 72.9% 92.7%
4277585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 54.0 5.58e-01 98.3% 89.1%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 49.0 4.77e-01 88.1% 66.2%
4965811 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.70 59.0 5.92e-01 93.2% 90.0%
3978422 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.69 48.0 4.98e-01 74.6% 87.3%
3945581 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.69 47.0 4.88e-01 71.2% 83.6%
4944329 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 53.0 5.58e-01 100.0% 100.0%
4626289 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.67 51.0 5.03e-01 98.3% 76.9%
3513766 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.66 53.0 4.22e-01 89.8% 72.8%
3947727 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 45.0 4.81e-01 71.2% 92.0%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.64 58.0 4.75e-01 100.0% 58.1%
3603554 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.64 49.0 4.31e-01 84.7% 65.6%
4034594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 48.0 4.92e-01 98.3% 87.3%
3987671 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 50.0 5.19e-01 98.3% 94.5%
4094272 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.63 48.0 4.95e-01 96.6% 89.1%
3974184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 48.0 4.97e-01 98.3% 90.9%
4142269 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.63 48.0 5.01e-01 98.3% 90.9%
3946233 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 44.0 4.52e-01 74.6% 87.3%
3517520 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.62 48.0 4.79e-01 98.3% 83.3%
4121950 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.62 47.0 4.84e-01 98.3% 89.1%
4008367 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 49.0 5.09e-01 93.2% 94.5%
3967218 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 42.0 4.35e-01 74.6% 87.3%
3281262 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.60 47.0 4.88e-01 98.3% 94.5%
4954184 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.60 48.0 4.21e-01 88.1% 64.4%
3979732 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 49.0 4.75e-01 98.3% 84.6%
3945103 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.55 41.0 4.19e-01 96.6% 89.1%