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pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00175
Bact-Virpig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00175
Identity
- Kingdom:
- phage
Quality
85.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-180
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01467.33 best | CTP_transf_like | 25.3 | 2.10e-05 | 69.5% | 42.1% |
CATH (70)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yumA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 67.0 | 5.97e-01 | 97.4% | 83.0% |
| 3elbA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 58.0 | 5.69e-01 | 98.1% | 78.8% |
| 4ymiB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 67.0 | 6.06e-01 | 98.1% | 82.3% |
| 2h29A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 65.0 | 6.07e-01 | 97.4% | 81.9% |
| 5lltA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 64.0 | 5.79e-01 | 97.4% | 90.2% |
| 1k4kB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 63.0 | 5.73e-01 | 98.1% | 83.3% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 55.0 | 5.90e-01 | 95.5% | 99.2% |
| 1j1uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 61.0 | 5.62e-01 | 96.8% | 89.3% |
| 1jhdA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 61.0 | 5.48e-01 | 96.1% | 82.3% |
| 1dnpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 53.0 | 5.75e-01 | 93.5% | 100.0% |
| 6hcdD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 52.0 | 5.57e-01 | 92.9% | 94.1% |
| 2ielA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 52.0 | 5.59e-01 | 93.5% | 100.0% |
| 3oqiA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.64 | 57.0 | 5.04e-01 | 96.1% | 96.4% |
| 2wq7A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 53.0 | 5.57e-01 | 94.8% | 99.3% |
| 2x9qB00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.64 | 57.0 | 5.05e-01 | 97.4% | 89.6% |
| 2hoqA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.62 | 50.0 | 4.99e-01 | 85.1% | 100.0% |
| 3idfA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 52.0 | 5.48e-01 | 92.9% | 100.0% |
| 1xo1A02 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.62 | 48.0 | 4.83e-01 | 92.9% | 79.9% |
| 1mrzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 54.0 | 5.42e-01 | 95.5% | 97.5% |
| 3fg9C01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 52.0 | 5.50e-01 | 92.2% | 100.0% |
| 3sqsA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.61 | 51.0 | 4.34e-01 | 89.0% | 97.6% |
| 3s6gY01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.61 | 53.0 | 4.45e-01 | 94.2% | 85.4% |
| 2pg3A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 55.0 | 4.83e-01 | 96.8% | 89.5% |
| 3qy7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 49.0 | 4.19e-01 | 85.7% | 100.0% |
| 3olqA00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 54.0 | 4.33e-01 | 97.4% | 52.3% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 54.0 | 4.99e-01 | 97.4% | 84.3% |
| 6mp7A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 53.0 | 4.06e-01 | 94.2% | 95.5% |
| 1xhbA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.60 | 53.0 | 4.52e-01 | 95.5% | 94.7% |
| 2yl8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 52.0 | 4.02e-01 | 96.1% | 95.9% |
| 2yv5A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 52.0 | 5.22e-01 | 97.4% | 94.2% |
| 2xadA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.59 | 53.0 | 4.45e-01 | 97.4% | 90.0% |
| 3n4eA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 49.0 | 4.14e-01 | 89.6% | 89.0% |
| 4gc3A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 47.0 | 3.90e-01 | 83.8% | 94.7% |
| 2yxoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 46.0 | 3.84e-01 | 83.1% | 92.5% |
| 3pxxD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.15e-01 | 96.8% | 71.1% |
| 4pysA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 49.0 | 3.77e-01 | 96.8% | 95.7% |
| 4kl0A00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.56 | 50.0 | 3.86e-01 | 97.4% | 93.4% |
| 1peaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 47.0 | 4.50e-01 | 89.6% | 93.2% |
| 3vkjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 3.57e-01 | 89.6% | 88.2% |
| 1itcA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 49.0 | 3.63e-01 | 96.8% | 96.2% |
| 1k7cA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 43.0 | 3.76e-01 | 81.8% | 97.0% |
| 1b5tA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.55 | 48.0 | 3.99e-01 | 94.8% | 95.3% |
| 6fnuA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.55 | 48.0 | 3.89e-01 | 94.8% | 91.9% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 46.0 | 4.64e-01 | 88.3% | 98.7% |
| 5ereA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 41.0 | 4.31e-01 | 85.1% | 86.9% |
| 2eplX02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 48.0 | 3.86e-01 | 96.1% | 95.1% |
| 3hs3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 4.59e-01 | 87.0% | 94.2% |
| 2amxB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 47.0 | 3.66e-01 | 94.8% | 83.7% |
| 1i60A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 44.0 | 3.65e-01 | 86.4% | 94.6% |
| 2px7A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 49.0 | 4.43e-01 | 96.8% | 100.0% |
| 2r60A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 48.0 | 4.35e-01 | 98.1% | 80.9% |
| 3s28A04 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 48.0 | 4.26e-01 | 98.7% | 80.2% |
| 1vr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 47.0 | 3.96e-01 | 96.8% | 85.4% |
| 4n03A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 45.0 | 4.38e-01 | 90.9% | 94.9% |
| 2ftyA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 46.0 | 3.44e-01 | 94.2% | 97.8% |
| 3tsaA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 44.0 | 4.27e-01 | 89.0% | 86.4% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 3.98e-01 | 96.8% | 87.4% |
| 5tcgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 4.01e-01 | 96.8% | 88.8% |
| 1a5aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 4.01e-01 | 98.1% | 88.2% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 40.0 | 4.22e-01 | 87.0% | 91.8% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.52 | 43.0 | 4.44e-01 | 90.3% | 94.4% |
| 3ce9A01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 42.0 | 4.26e-01 | 86.4% | 87.1% |
| 4wiwD01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 45.0 | 3.71e-01 | 95.5% | 94.6% |
| 3igsB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 38.0 | 3.34e-01 | 76.0% | 90.5% |
| 3gbvA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 42.0 | 4.32e-01 | 90.3% | 92.6% |
| 5kinC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 45.0 | 3.81e-01 | 95.5% | 90.1% |
| 3ia7A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 42.0 | 4.16e-01 | 89.0% | 92.0% |
| 1g5aA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 43.0 | 3.30e-01 | 94.2% | 91.4% |
| 5c3mC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 42.0 | 4.16e-01 | 92.2% | 86.8% |
| 2vsnA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 45.0 | 4.00e-01 | 100.0% | 71.4% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4123648 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.78 | 64.0 | 6.24e-01 | 97.4% | 78.1% |
| 4993881 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.75 | 50.0 | 5.98e-01 | 92.2% | 100.0% |
| 4503157 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.74 | 68.0 | 6.06e-01 | 98.1% | 85.2% |
| 4253527 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.72 | 66.0 | 6.01e-01 | 96.8% | 83.5% |
| 4235307 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.72 | 65.0 | 6.03e-01 | 94.8% | 86.8% |
| 4640339 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.72 | 67.0 | 6.02e-01 | 97.4% | 83.0% |
| 5067783 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.72 | 51.0 | 5.84e-01 | 90.3% | 100.0% |
| 4683526 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.71 | 66.0 | 6.12e-01 | 98.1% | 91.1% |
| 4417579 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.71 | 65.0 | 6.01e-01 | 96.8% | 93.2% |
| 4043476 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.71 | 66.0 | 6.01e-01 | 96.8% | 82.9% |
| 4155711 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.71 | 67.0 | 6.04e-01 | 99.4% | 79.0% |
| 4613788 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.70 | 64.0 | 5.81e-01 | 96.8% | 85.5% |
| 5064022 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.68 | 60.0 | 5.81e-01 | 96.8% | 84.1% |
| 3210647 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.67 | 54.0 | 5.85e-01 | 92.2% | 100.0% |
| 2391911 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 52.0 | 5.57e-01 | 92.9% | 94.1% |
| 4151896 | 2005.1.1.15 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase | 0.67 | 60.0 | 5.37e-01 | 97.4% | 84.2% |
| 5011207 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.66 | 52.0 | 5.70e-01 | 92.2% | 100.0% |
| 4946514 | 2005.1.1.15 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase | 0.66 | 61.0 | 5.26e-01 | 99.4% | 90.9% |
| 5009930 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.65 | 52.0 | 5.54e-01 | 93.5% | 95.6% |
| 5040746 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 53.0 | 5.71e-01 | 96.1% | 100.0% |
| 4959820 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 55.0 | 5.74e-01 | 96.8% | 98.6% |
| 5021191 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 55.0 | 5.76e-01 | 96.8% | 98.6% |
| 4584156 | 2005.1.1.31 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CDPS | 0.65 | 58.0 | 5.14e-01 | 98.1% | 95.1% |
| 4959831 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 52.0 | 5.55e-01 | 93.5% | 100.0% |
| 4992162 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 54.0 | 5.63e-01 | 94.8% | 95.8% |
| None | — | 0.64 | 59.0 | 5.15e-01 | 99.4% | 86.5% | |
| 4931828 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 54.0 | 5.68e-01 | 96.1% | 99.3% |
| 9860 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 52.0 | 5.59e-01 | 93.5% | 100.0% |
| 5012429 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 53.0 | 5.67e-01 | 94.8% | 100.0% |
| 3446564 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 53.0 | 5.50e-01 | 94.8% | 93.8% |
| 2583942 | 7592.1.1.4 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Cas_Csm6_CARF | 0.64 | 56.0 | 5.45e-01 | 98.1% | 85.4% |
| 3993632 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.64 | 55.0 | 5.73e-01 | 92.9% | 100.0% |
| 4191066 | 2005.1.1.15 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase | 0.63 | 57.0 | 5.01e-01 | 97.4% | 84.5% |
| 4961825 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 54.0 | 5.45e-01 | 96.8% | 94.0% |
| 5021190 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.63 | 55.0 | 5.62e-01 | 97.4% | 96.7% |
| 4011465 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 55.0 | 5.14e-01 | 96.8% | 77.3% |
| 5079075 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.63 | 55.0 | 5.27e-01 | 98.1% | 82.9% |
| 135916 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.62 | 52.0 | 5.48e-01 | 92.9% | 100.0% |
| 4971716 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.61 | 52.0 | 5.43e-01 | 95.5% | 98.6% |
| 5005878 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.61 | 53.0 | 5.45e-01 | 98.1% | 98.0% |
| 4031282 | 2002.1.1.96 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans | 0.61 | 53.0 | 4.25e-01 | 93.5% | 89.2% |
| 5071204 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.61 | 53.0 | 5.52e-01 | 95.5% | 100.0% |
| 4946146 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.60 | 48.0 | 5.09e-01 | 94.2% | 96.3% |
| 3839224 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.60 | 50.0 | 5.29e-01 | 90.9% | 100.0% |
| 3286082 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.60 | 53.0 | 5.37e-01 | 96.1% | 100.0% |
| 5025252 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.60 | 51.0 | 5.35e-01 | 91.6% | 100.0% |
| 3276772 | 7516.1.1.14 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I | 0.60 | 53.0 | 4.10e-01 | 96.1% | 51.5% |
| 3447926 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.59 | 41.0 | 4.46e-01 | 90.3% | 88.7% |
| 5022820 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 53.0 | 4.84e-01 | 99.4% | 79.0% |
| 332215 | 2002.1.1.103 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP,PHP_C | 0.58 | 46.0 | 3.84e-01 | 83.1% | 92.5% |
| 4957804 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.58 | 47.0 | 4.42e-01 | 88.3% | 87.2% |
| 222951 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.57 | 45.0 | 3.80e-01 | 82.5% | 94.6% |
| 4133364 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.57 | 50.0 | 4.04e-01 | 95.5% | 68.8% |
| 4662945 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 45.0 | 4.29e-01 | 97.4% | 70.3% |
| 3457387 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.56 | 49.0 | 4.72e-01 | 96.1% | 86.3% |
| 4326744 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.55 | 49.0 | 4.13e-01 | 97.4% | 89.6% |
| 5055608 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.55 | 46.0 | 3.88e-01 | 89.6% | 97.6% |
| 3360085 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.55 | 48.0 | 4.78e-01 | 96.8% | 98.8% |
| 3810688 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.54 | 47.0 | 4.70e-01 | 94.8% | 98.8% |
| 4999390 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 45.0 | 4.12e-01 | 90.9% | 87.1% |
| 4959029 | 2007.2.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins | 0.54 | 40.0 | 3.77e-01 | 76.6% | 85.4% |
| 4476618 | 7512.1.1.63 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1+GT-B_Sucrose_synth | 0.54 | 48.0 | 4.08e-01 | 98.7% | 71.4% |
| 4557666 | 7512.1.1.63 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1+GT-B_Sucrose_synth | 0.54 | 48.0 | 3.34e-01 | 98.7% | 34.7% |
| 4288654 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.54 | 43.0 | 4.42e-01 | 83.8% | 98.6% |
| 4251513 | 2008.1.1.156 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29906 | 0.53 | 43.0 | 4.16e-01 | 85.7% | 98.2% |
| 4650887 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 43.0 | 4.03e-01 | 98.1% | 71.9% |
| 2771289 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.52 | 44.0 | 4.43e-01 | 90.3% | 92.9% |
| 4958342 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 43.0 | 3.30e-01 | 89.0% | 90.1% |
| 4999394 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 46.0 | 4.18e-01 | 98.7% | 71.6% |
| 5083434 | 7544.1.1.0 ↗ | a/b three-layered sandwiches › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.52 | 46.0 | 3.64e-01 | 98.1% | 51.8% |
| 4492246 | 2002.1.1.81 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiC_Rad_SAM | 0.52 | 45.0 | 3.24e-01 | 96.8% | 63.9% |
| 2061907 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.52 | 42.0 | 4.42e-01 | 90.3% | 99.3% |
| 5046946 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 44.0 | 3.67e-01 | 93.5% | 95.3% |
| 5079827 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.51 | 43.0 | 4.08e-01 | 90.3% | 89.2% |
| 4972356 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 43.0 | 4.07e-01 | 90.9% | 83.2% |
| 4098742 | 7542.1.1.1 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase | 0.51 | 43.0 | 4.23e-01 | 96.8% | 85.5% |
| 5045191 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 45.0 | 4.31e-01 | 97.4% | 97.2% |
| 3447244 | 2488.1.1.12 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA | 0.50 | 43.0 | 4.18e-01 | 93.5% | 88.0% |
| 5009872 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.50 | 44.0 | 4.18e-01 | 94.8% | 100.0% |
| 3895050 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.50 | 43.0 | 4.15e-01 | 90.9% | 85.9% |
D2
medium
residues 181-231
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3of4A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.63 | 46.0 | 3.07e-01 | 78.4% | 41.1% |
| 3od1A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 44.0 | 2.71e-01 | 78.4% | 13.1% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 39.0 | 3.63e-01 | 72.5% | 51.5% |
| 3qxzA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.60 | 41.0 | 3.94e-01 | 70.6% | 61.7% |
| 7kznP01 | 3.30.740.10 | Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 0.57 | 40.0 | 3.43e-01 | 76.5% | 74.2% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.55 | 40.0 | 3.79e-01 | 80.4% | 65.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3389608 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.75 | 61.0 | 6.20e-01 | 92.2% | 96.0% |
| None | — | 0.73 | 53.0 | 4.52e-01 | 78.4% | 47.1% | |
| 3990848 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 5.84e-01 | 94.1% | 92.7% |
| 5064314 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 51.0 | 4.90e-01 | 78.4% | 70.0% |
| 5077992 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 53.0 | 4.75e-01 | 86.3% | 64.0% |
| 3593689 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 57.0 | 5.47e-01 | 98.0% | 93.3% |
| 3958460 | 6113.1.1.1 ↗ | alpha duplicates or obligate multimers › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases › PKS_DE | 0.67 | 49.0 | 4.77e-01 | 80.4% | 70.7% |
| 4971366 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 4.62e-01 | 86.3% | 66.7% |
| 3717702 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.66 | 56.0 | 5.26e-01 | 100.0% | 87.7% |
| 3949663 | 101.1.1.307 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF3071 | 0.65 | 45.0 | 4.85e-01 | 84.3% | 95.0% |
| 3784506 | 6058.1.1.1 ↗ | alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › DAO_C | 0.62 | 49.0 | 3.66e-01 | 88.2% | 48.9% |
| 4940509 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 41.0 | 3.42e-01 | 82.4% | 89.0% |
D3
medium
residues 255-282_451-526
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.68 | 44.0 | 4.33e-01 | 72.1% | 62.4% |
| 3rvyA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 46.0 | 4.64e-01 | 71.2% | 95.3% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 43.0 | 4.74e-01 | 86.5% | 88.1% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.63 | 39.0 | 3.89e-01 | 71.2% | 58.9% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.62 | 43.0 | 4.26e-01 | 74.0% | 67.9% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 54.0 | 5.19e-01 | 96.2% | 86.4% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.61 | 49.0 | 4.46e-01 | 84.6% | 66.7% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 47.0 | 4.56e-01 | 83.7% | 95.7% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 49.0 | 4.54e-01 | 90.4% | 87.3% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 45.0 | 4.48e-01 | 88.5% | 76.9% |
| 1st6A03 | 1.20.120.810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle | 0.59 | 52.0 | 4.09e-01 | 100.0% | 97.8% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.59 | 47.0 | 3.88e-01 | 87.5% | 58.0% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 43.0 | 4.20e-01 | 80.8% | 72.1% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 46.0 | 4.69e-01 | 90.4% | 87.4% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 37.0 | 3.76e-01 | 99.0% | 65.7% |
| 1qkrB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.57 | 51.0 | 4.31e-01 | 100.0% | 96.1% |
| 1z23A00 | 1.20.120.830 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain | 0.57 | 47.0 | 4.09e-01 | 90.4% | 86.5% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 38.0 | 3.39e-01 | 73.1% | 47.6% |
| 1x9mA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 50.0 | 3.89e-01 | 99.0% | 85.8% |
| 1qgtB00 | 1.10.4090.10 | Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus | 0.55 | 50.0 | 4.49e-01 | 100.0% | 82.5% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.55 | 43.0 | 4.26e-01 | 81.7% | 99.1% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.55 | 35.0 | 3.50e-01 | 70.2% | 61.3% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 36.0 | 3.68e-01 | 75.0% | 69.3% |
| 5iduA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 33.0 | 3.18e-01 | 77.9% | 52.5% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 40.0 | 3.47e-01 | 79.8% | 70.9% |
| 5fglA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 41.0 | 3.35e-01 | 83.7% | 62.5% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 44.0 | 3.92e-01 | 96.2% | 90.3% |
| 4d0nB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.50 | 41.0 | 3.16e-01 | 89.4% | 42.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3579981 | 632.11.1.14 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › TMEM107 | 0.63 | 51.0 | 5.23e-01 | 86.5% | 95.0% |
| 150274 | 601.16.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › Focal_AT | 0.63 | 52.0 | 4.79e-01 | 90.4% | 82.7% |
| 5019504 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.63 | 51.0 | 4.54e-01 | 87.5% | 71.3% |
| 3257705 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.63 | 51.0 | 5.31e-01 | 85.6% | 97.9% |
| 5075952 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.63 | 52.0 | 4.86e-01 | 89.4% | 87.5% |
| 3214189 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 40.0 | 3.99e-01 | 72.1% | 64.8% |
| 3972755 | 601.1.2.99 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DAGK_prokar | 0.61 | 48.0 | 4.65e-01 | 83.7% | 77.1% |
| 4175767 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.61 | 50.0 | 5.02e-01 | 88.5% | 90.5% |
| 4210734 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.61 | 50.0 | 4.98e-01 | 87.5% | 93.3% |
| 3819361 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.61 | 50.0 | 4.40e-01 | 88.5% | 66.0% |
| 3449605 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.60 | 49.0 | 4.85e-01 | 88.5% | 90.9% |
| 3428029 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.59 | 44.0 | 4.56e-01 | 79.8% | 92.0% |
| 3693286 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.59 | 51.0 | 4.20e-01 | 97.1% | 52.8% |
| 4012236 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.58 | 48.0 | 4.16e-01 | 88.5% | 61.9% |
| 2625677 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.58 | 43.0 | 4.20e-01 | 80.8% | 72.1% |
| 3203655 | 601.16.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase | 0.58 | 48.0 | 4.36e-01 | 90.4% | 88.6% |
| 3617266 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.57 | 48.0 | 4.63e-01 | 92.3% | 85.0% |
| 4025051 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.57 | 49.0 | 4.37e-01 | 94.2% | 90.0% |
| 3297061 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.57 | 44.0 | 4.33e-01 | 82.7% | 80.0% |
| 3443676 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.57 | 47.0 | 4.80e-01 | 86.5% | 90.0% |
| 3450792 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.57 | 46.0 | 4.36e-01 | 87.5% | 80.8% |
| 3209446 | 632.22.1.131 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › SOG2 | 0.56 | 51.0 | 4.67e-01 | 100.0% | 84.4% |
| 3880538 | 632.1.1.28 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF2678 | 0.55 | 41.0 | 4.42e-01 | 81.7% | 96.5% |
| 3690563 | 150.1.1.81 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › SOG2 | 0.55 | 49.0 | 4.55e-01 | 100.0% | 84.4% |
| 5054790 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.54 | 44.0 | 3.93e-01 | 89.4% | 78.7% |
| 3453826 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.54 | 44.0 | 4.32e-01 | 89.4% | 93.0% |
| 3936613 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.54 | 45.0 | 3.60e-01 | 93.3% | 82.1% |
| 3192001 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.52 | 44.0 | 4.07e-01 | 96.2% | 75.7% |
| 3526270 | 5054.1.1.9 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PKD_channel | 0.51 | 44.0 | 3.22e-01 | 96.2% | 89.3% |
| 3236334 | 206.1.1.88 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL, DUF1679 | 0.50 | 44.0 | 2.95e-01 | 98.1% | 49.4% |
| 3471396 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.50 | 40.0 | 4.19e-01 | 88.5% | 92.6% |
D4
medium
residues 283-450_527-568
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qwuA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.65 | 47.0 | 5.10e-01 | 86.7% | 87.2% |
| 1xdnA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.64 | 45.0 | 5.22e-01 | 71.9% | 100.0% |
| 6p0cA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.61 | 37.0 | 4.69e-01 | 71.0% | 100.0% |
| 6imjA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.58 | 46.0 | 4.88e-01 | 86.2% | 91.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4962282 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.67 | 54.0 | 5.58e-01 | 93.3% | 88.7% |
| 3594981 | 206.1.3.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase | 0.65 | 56.0 | 4.98e-01 | 91.4% | 81.0% |
| 3927529 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.58 | 49.0 | 4.73e-01 | 89.0% | 82.5% |
| 4000577 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.58 | 49.0 | 4.61e-01 | 89.0% | 76.1% |
| 3315215 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.58 | 48.0 | 4.69e-01 | 87.1% | 87.4% |
| 3580961 | 4095.1.1.3 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M | 0.57 | 50.0 | 3.91e-01 | 91.0% | 47.4% |
| 3704759 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.57 | 49.0 | 4.71e-01 | 91.4% | 81.7% |
| 3947455 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.57 | 49.0 | 4.86e-01 | 91.0% | 87.4% |
| 4600922 | 4095.1.1.0 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain | 0.56 | 47.0 | 3.68e-01 | 87.1% | 43.3% |
| 4914243 | 206.1.3.116 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M, DNA_ligase_A_C | 0.56 | 46.0 | 4.73e-01 | 90.5% | 88.3% |
| 3599023 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.55 | 46.0 | 4.48e-01 | 86.7% | 80.4% |
| 3605538 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.55 | 47.0 | 4.37e-01 | 91.0% | 80.8% |
| 3328725 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.53 | 41.0 | 4.27e-01 | 87.6% | 85.0% |