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pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00180
Bact-Virpig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00180
Identity
- Kingdom:
- phage
Quality
93.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-190
Domain cluster:
rep: OQ414636.1__WDQ27620.1__EXVC031PHodr_039__00039__D9-186
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tqeA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.61 | 25.0 | 3.98e-01 | 80.4% | 100.0% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 26.0 | 3.95e-01 | 75.7% | 100.0% |
| 2xs2A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 29.0 | 3.94e-01 | 79.4% | 100.0% |
| 1fjcA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 28.0 | 3.79e-01 | 74.1% | 91.7% |
| 2dnnA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 27.0 | 3.70e-01 | 81.5% | 100.0% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 28.0 | 3.79e-01 | 76.2% | 100.0% |
| 1r9wA00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.53 | 34.0 | 3.95e-01 | 86.8% | 87.7% |
| 1f08B00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.53 | 36.0 | 4.04e-01 | 86.8% | 88.3% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 22.0 | 3.41e-01 | 79.9% | 98.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031372 | 862.1.1.12 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › PF29905 | 0.81 | 77.0 | 7.58e-01 | 100.0% | 97.0% |
| 3587269 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.73 | 67.0 | 6.67e-01 | 96.3% | 98.5% |
| 5011497 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.67 | 59.0 | 5.83e-01 | 92.6% | 88.5% |
| 4441734 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.66 | 59.0 | 5.96e-01 | 96.8% | 96.2% |
| 5023057 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.63 | 28.0 | 4.17e-01 | 79.9% | 100.0% |
| 3477735 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 32.0 | 4.09e-01 | 83.6% | 95.0% |
| 4971785 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 28.0 | 3.96e-01 | 79.9% | 94.4% |
| 3645251 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.57 | 34.0 | 4.03e-01 | 72.5% | 88.0% |
| 3327600 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.56 | 24.0 | 3.11e-01 | 76.7% | 67.6% |
| 3485714 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 29.0 | 3.83e-01 | 77.2% | 93.0% |
| 3457974 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.55 | 25.0 | 3.50e-01 | 75.1% | 89.3% |
| 3249128 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 26.0 | 3.65e-01 | 73.0% | 92.2% |
| 3475798 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 28.0 | 3.71e-01 | 74.6% | 90.0% |
| 3681868 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 28.0 | 3.67e-01 | 71.4% | 86.7% |
| 2791434 | 304.55.1.10 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › PPV_E1_DBD | 0.55 | 37.0 | 4.07e-01 | 86.8% | 84.2% |
| 3492512 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.55 | 50.0 | 4.23e-01 | 100.0% | 85.6% |
| 3517530 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 28.0 | 3.64e-01 | 72.0% | 86.7% |
| 3997243 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.54 | 22.0 | 3.26e-01 | 75.7% | 85.0% |
| 3609138 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 29.0 | 3.64e-01 | 82.5% | 86.4% |
| 3914969 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 28.0 | 3.70e-01 | 76.2% | 92.0% |
| 3216877 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.54 | 25.0 | 3.48e-01 | 75.1% | 91.8% |
| 3412680 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 30.0 | 3.74e-01 | 72.5% | 88.7% |
| 4013551 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.53 | 25.0 | 3.33e-01 | 75.7% | 83.0% |
| 3619322 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.52 | 25.0 | 3.36e-01 | 75.1% | 87.2% |
| 3930134 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.52 | 25.0 | 3.37e-01 | 75.1% | 87.4% |
| 3384982 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 29.0 | 3.79e-01 | 74.6% | 99.0% |
| 3501995 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.51 | 24.0 | 3.39e-01 | 75.1% | 96.5% |
D2
high
residues 198-282
Domain cluster:
rep: IMGVR_UViG_3300031867_008378-3300031867-Ga0326511_100074391__D133-198