Back to structures

pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00276

Bact-Vir

pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00276

Identity

Kingdom:
phage

Quality

75.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-106
PDB
CATH (99)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vbkA03 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.80 61.0 5.68e-01 100.0% 64.7%
3zf8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.72 66.0 4.77e-01 100.0% 39.2%
2bo4A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.72 63.0 5.20e-01 98.1% 53.1%
2o20A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 58.0 5.36e-01 88.7% 92.7%
1tq8A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 57.0 5.39e-01 100.0% 73.2%
4wd3A01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 51.0 4.88e-01 98.1% 66.7%
3nbkD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 55.0 4.80e-01 100.0% 55.2%
1xq6A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 56.0 4.26e-01 87.7% 87.7%
1qg8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.69 59.0 4.53e-01 100.0% 41.2%
2bgiA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.69 61.0 5.43e-01 99.1% 94.2%
6xl1A01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.69 62.0 5.41e-01 98.1% 77.4%
2jaxA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 57.0 5.39e-01 98.1% 76.0%
2f9fA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.68 51.0 4.39e-01 99.1% 50.0%
3e3mA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 56.0 5.07e-01 89.6% 91.0%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.68 60.0 4.19e-01 96.2% 88.9%
7ec2A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.68 45.0 4.05e-01 99.1% 47.7%
4zjpA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 56.0 5.08e-01 90.6% 89.6%
1k92A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 55.0 4.77e-01 100.0% 58.1%
3ragB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.67 61.0 4.74e-01 100.0% 89.8%
3s28A04 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.67 58.0 4.57e-01 100.0% 44.9%
4j1qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 54.0 3.64e-01 88.7% 29.7%
2a35A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 55.0 4.41e-01 89.6% 88.9%
4ac9C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 56.0 4.67e-01 92.5% 53.0%
3glvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 54.0 5.19e-01 100.0% 76.2%
3a2kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 58.0 5.40e-01 97.2% 79.3%
6vloD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 55.0 4.33e-01 88.7% 87.6%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 55.0 4.38e-01 100.0% 45.3%
2eplX02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 58.0 4.22e-01 100.0% 93.5%
5ix8A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 53.0 4.71e-01 89.6% 81.8%
3ab8A00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 59.0 4.37e-01 98.1% 53.6%
7zllA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.65 58.0 4.30e-01 98.1% 38.3%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.65 53.0 4.62e-01 88.7% 96.4%
4gicA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.65 59.0 5.35e-01 100.0% 81.9%
3u6uC00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.65 57.0 4.27e-01 97.2% 95.1%
1f2dA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 56.0 5.70e-01 100.0% 98.0%
3v3tA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.65 55.0 4.46e-01 93.4% 95.6%
2derB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 59.0 4.74e-01 100.0% 61.6%
4kruA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 52.0 4.18e-01 87.7% 90.2%
4yleA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 53.0 4.82e-01 90.6% 89.7%
1foaA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.64 58.0 4.61e-01 100.0% 51.2%
3cr8C02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 57.0 4.68e-01 100.0% 61.1%
5vlcA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.64 58.0 5.06e-01 100.0% 76.6%
2ielA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 57.0 5.31e-01 98.1% 98.5%
1fdrA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.64 56.0 5.02e-01 99.1% 92.1%
1vluB02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.64 56.0 5.04e-01 96.2% 95.2%
1r6xA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 57.0 4.54e-01 100.0% 66.7%
2pg3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 57.0 4.45e-01 98.1% 68.2%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 56.0 5.22e-01 100.0% 80.0%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 57.0 4.82e-01 99.1% 83.2%
3tnjA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 57.0 5.47e-01 100.0% 96.7%
3kw2B02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.63 56.0 4.83e-01 100.0% 87.6%
3t5tA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 57.0 4.67e-01 100.0% 76.1%
1xngA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 57.0 4.29e-01 100.0% 53.8%
1jhdA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 55.0 4.50e-01 100.0% 82.8%
3cisH00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 55.0 4.08e-01 100.0% 47.9%
4g1vA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.61 55.0 5.12e-01 100.0% 87.5%
1rliD00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.61 49.0 4.27e-01 87.7% 100.0%
5dxfA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.61 55.0 4.41e-01 100.0% 70.5%
1cozA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 54.0 5.16e-01 99.1% 89.7%
1ykgA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.60 50.0 4.55e-01 91.5% 69.2%
6yttA02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 55.0 4.68e-01 100.0% 87.6%
2vyoA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.60 54.0 4.35e-01 100.0% 79.6%
4j3cB02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.60 54.0 4.67e-01 100.0% 86.1%
2p11A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.60 54.0 4.86e-01 100.0% 90.3%
3elbA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 54.0 4.96e-01 100.0% 87.6%
5djsA02 3.40.50.11380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 54.0 4.45e-01 100.0% 57.4%
3lnpA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.59 53.0 3.83e-01 99.1% 84.8%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 4.07e-01 88.7% 73.0%
2i6dA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.59 53.0 4.63e-01 99.1% 87.3%
2g8lA03 3.40.50.10880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF01937, DUF89, domain 3 0.59 53.0 4.72e-01 100.0% 74.8%
3lqkA00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.58 54.0 4.34e-01 100.0% 63.9%
3oy2A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 49.0 3.84e-01 100.0% 42.7%
5kzkA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.58 53.0 4.62e-01 100.0% 86.5%
1d6nA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 47.0 3.76e-01 88.7% 64.5%
3gyqA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.58 52.0 4.53e-01 100.0% 82.9%
8g64A01 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.58 47.0 4.09e-01 89.6% 100.0%
4rheC00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.58 52.0 4.23e-01 100.0% 67.7%
3nb0B02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 51.0 3.96e-01 100.0% 45.9%
4wqmA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.57 51.0 4.74e-01 99.1% 94.0%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 48.0 4.19e-01 99.1% 59.6%
6i3mE02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.57 51.0 4.15e-01 99.1% 57.0%
1mxiA00 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.57 51.0 4.50e-01 99.1% 85.3%
7zp2C02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.57 51.0 4.50e-01 100.0% 71.2%
3ia7A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 51.0 3.91e-01 100.0% 54.9%
2wesA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 50.0 3.23e-01 100.0% 66.1%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.55 46.0 3.12e-01 93.4% 30.5%
1jqlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 46.0 4.28e-01 94.3% 97.1%
1iirA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 48.0 3.86e-01 100.0% 53.4%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 48.0 3.84e-01 99.1% 95.0%
7bovA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 48.0 3.94e-01 99.1% 56.7%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 47.0 3.05e-01 99.1% 64.2%
4emiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 47.0 4.01e-01 99.1% 92.6%
2x5nA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.52 46.0 3.94e-01 100.0% 79.3%
1fcdA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 47.0 3.91e-01 100.0% 81.4%
4fx5A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.52 47.0 3.91e-01 100.0% 95.1%
3f5fA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 37.0 2.80e-01 76.4% 62.9%
3d3kA00 3.40.50.10260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain 0.51 45.0 3.56e-01 100.0% 52.4%
4hlnA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 42.0 3.18e-01 93.4% 43.7%
6frlA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 44.0 2.91e-01 100.0% 66.6%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057863 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.78 62.0 4.72e-01 100.0% 37.5%
3573985 7516.1.1.35 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Branch 0.75 69.0 5.32e-01 100.0% 47.1%
4933886 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.73 56.0 4.66e-01 99.1% 47.0%
4933955 7592.1.1.6 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N 0.72 66.0 5.84e-01 100.0% 72.0%
5038196 7512.1.1.32 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.72 56.0 4.50e-01 100.0% 43.5%
4964485 7592.1.1.3 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N 0.71 64.0 5.47e-01 99.1% 84.7%
4891181 7516.1.1.26 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3 0.71 66.0 4.31e-01 100.0% 29.0%
4950705 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.71 59.0 5.53e-01 100.0% 73.8%
5077204 7592.1.1.3 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N 0.71 64.0 5.54e-01 100.0% 77.0%
5040846 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.70 63.0 5.84e-01 99.1% 92.6%
4056922 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.70 57.0 5.40e-01 100.0% 74.4%
4955707 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.70 64.0 5.98e-01 100.0% 98.5%
151025 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.69 59.0 4.96e-01 92.5% 97.8%
4997440 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.69 63.0 5.91e-01 100.0% 97.7%
4136884 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.69 63.0 4.90e-01 99.1% 95.5%
3640797 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.69 63.0 5.48e-01 100.0% 96.2%
4979883 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.69 63.0 5.73e-01 100.0% 90.0%
4559879 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.69 54.0 4.92e-01 84.0% 97.9%
4928434 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.68 55.0 4.71e-01 99.1% 53.4%
3583171 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.68 61.0 5.30e-01 100.0% 68.5%
3243551 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.68 56.0 4.55e-01 100.0% 47.0%
3452376 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.68 61.0 5.55e-01 100.0% 73.6%
4108481 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.68 53.0 4.91e-01 84.0% 99.3%
4961826 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.68 56.0 5.32e-01 98.1% 75.2%
4602919 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.68 56.0 4.98e-01 89.6% 94.7%
3652829 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.68 62.0 5.62e-01 100.0% 92.1%
5028556 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.68 61.0 4.72e-01 100.0% 97.4%
4581408 2003.1.1.239 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4, KR 0.68 54.0 3.70e-01 87.7% 65.8%
4965301 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.68 61.0 5.68e-01 98.1% 99.2%
4946873 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 56.0 4.81e-01 89.6% 98.8%
4930591 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.67 55.0 5.08e-01 100.0% 69.6%
4597796 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.67 54.0 4.91e-01 87.7% 97.9%
3438965 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.67 58.0 6.00e-01 98.1% 100.0%
3622022 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.67 59.0 5.29e-01 100.0% 72.3%
4957334 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.67 60.0 5.70e-01 98.1% 100.0%
3222773 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.67 61.0 5.15e-01 100.0% 61.8%
5062673 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.67 59.0 5.78e-01 96.2% 100.0%
5041095 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 58.0 5.40e-01 99.1% 76.3%
4996206 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 60.0 5.57e-01 100.0% 94.8%
3834388 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.66 60.0 4.69e-01 100.0% 58.2%
4397420 7512.1.1.6 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.66 57.0 4.35e-01 100.0% 41.2%
4985079 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 60.0 5.50e-01 100.0% 97.0%
3288652 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.66 54.0 4.69e-01 89.6% 92.1%
3803150 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.66 59.0 4.94e-01 100.0% 77.8%
5064639 7524.1.1.2 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh 0.65 59.0 4.80e-01 100.0% 57.3%
2488644 2005.1.1.15 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.65 56.0 5.45e-01 100.0% 84.3%
3330674 2005.1.1.41 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.65 58.0 5.06e-01 100.0% 88.1%
5039199 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.65 53.0 4.70e-01 100.0% 61.3%
4499405 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.65 59.0 4.47e-01 100.0% 59.2%
4151896 2005.1.1.15 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.65 59.0 4.65e-01 100.0% 62.3%
5040746 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.65 58.0 5.39e-01 98.1% 96.2%
5017979 2007.2.1.6 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 0.65 54.0 4.58e-01 91.5% 98.3%
4475588 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.65 59.0 5.51e-01 100.0% 96.9%
3969383 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 58.0 5.47e-01 100.0% 96.2%
3627291 2007.2.1.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins 0.64 54.0 4.27e-01 92.5% 83.1%
3261893 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.64 57.0 5.45e-01 98.1% 99.2%
3592491 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 57.0 5.48e-01 98.1% 100.0%
4928866 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 57.0 5.40e-01 100.0% 95.4%
3435216 2005.1.1.41 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.64 58.0 4.89e-01 100.0% 78.3%
5021191 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.64 57.0 5.23e-01 99.1% 90.7%
3794179 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 57.0 4.85e-01 100.0% 78.3%
2488817 2005.1.1.15 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.64 57.0 4.57e-01 100.0% 68.2%
5077804 7567.1.1.1 a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.63 56.0 4.50e-01 100.0% 67.7%
4118447 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.63 54.0 4.20e-01 93.4% 60.0%
3970680 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.63 57.0 5.42e-01 99.1% 98.4%
5066284 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.63 56.0 5.30e-01 100.0% 96.2%
3740966 7512.1.1.6 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.63 57.0 4.60e-01 100.0% 71.2%
4532128 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.63 53.0 4.34e-01 91.5% 89.7%
1395085 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.63 57.0 4.40e-01 100.0% 90.5%
5012430 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.62 56.0 5.18e-01 100.0% 92.8%
4078594 2005.1.1.8 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth 0.62 57.0 4.70e-01 100.0% 78.4%
5023781 7567.1.1.1 a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.62 55.0 4.55e-01 100.0% 66.0%
4081900 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.62 56.0 4.92e-01 100.0% 78.8%
3320603 2005.1.1.41 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.62 55.0 4.97e-01 100.0% 94.7%
3345831 2005.1.1.78 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd, CHX17_C 0.62 56.0 3.97e-01 100.0% 43.7%
4094991 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.62 55.0 4.31e-01 100.0% 45.7%
4961979 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.62 56.0 5.08e-01 99.1% 88.6%
5067783 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 54.0 5.33e-01 96.2% 100.0%
4946514 2005.1.1.15 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.62 55.0 4.31e-01 100.0% 60.0%
4191066 2005.1.1.15 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.62 54.0 4.34e-01 100.0% 48.2%
4614930 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.61 54.0 4.24e-01 100.0% 46.8%
4396298 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.61 54.0 4.79e-01 99.1% 94.2%
4071834 2488.1.1.12 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA 0.61 55.0 4.71e-01 100.0% 86.4%
4670926 2003.1.5.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.61 51.0 3.78e-01 91.5% 80.4%
9823 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.61 54.0 5.16e-01 99.1% 89.7%
3395584 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.61 54.0 4.71e-01 99.1% 85.6%
4975517 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.60 54.0 4.52e-01 100.0% 64.3%
4985479 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.60 48.0 4.48e-01 99.1% 68.1%
4611545 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.60 54.0 4.24e-01 100.0% 71.7%
4964128 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.60 54.0 4.99e-01 99.1% 97.0%
3998087 2004.1.1.598 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 0.60 51.0 4.14e-01 92.5% 89.5%
1914070 7512.1.1.32 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.59 49.0 3.90e-01 100.0% 43.8%
4090697 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.58 51.0 4.03e-01 98.1% 60.9%
223215 2488.1.1.12 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA 0.58 51.0 4.48e-01 99.1% 87.2%
3239445 2496.1.1.1 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO 0.57 51.0 4.32e-01 100.0% 97.2%
5025230 7564.1.1.1 a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein 0.57 52.0 4.36e-01 100.0% 68.0%
3867821 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.56 52.0 3.73e-01 100.0% 50.3%
3985289 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.56 50.0 4.08e-01 99.1% 90.5%
4267972 2003.1.5.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.52 46.0 3.54e-01 100.0% 56.8%
3359336 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.52 46.0 3.70e-01 100.0% 95.3%
D2 medium residues 107-298
PDB
Domain cluster: representative