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pol
Euk-VirRhesus_macaque_simian_foamy_virus
pol__YP_009513242__Rhesus_macaque_simian_foamy_virus__2170199
Identity
- Accession:
- YP_009513242 ↗
- Protein ID:
- pol
- Kingdom:
- euk
Quality
82.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-93
Domain cluster:
rep: protease,_partial__YP_009305200__Simian_retrovirus_8__1904439__D173-265
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03539.20 best | Spuma_A9PTase | 138.1 | 4.40e-40 | 87.9% | 49.1% |
D2
high
residues 613-738
Domain cluster:
rep: MT074142.1__QIG64404.1__DAC23_126__00126__D2-193
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00075.31 best | RNase_H | 50.6 | 3.40e-13 | 99.2% | 68.8% |
D3
high
residues 861-1020
Domain cluster:
rep: KX077896.1__ANM47701.1__X__00070__D117-246_318-381
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00665.33 best | rve | 57.8 | 1.60e-15 | 60.6% | 98.0% |
D4
medium
residues 99-152_229-260_288-367
Domain cluster:
rep: IMGVR_UViG_3300021288_000040-3300021288-Ga0214511_10009611__D472-499_578-609_637-721
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00078.33 best | RVT_1 | 47.2 | 3.50e-12 | 45.8% | 40.5% |
| PF03539.20 | Spuma_A9PTase | 80.3 | 2.60e-22 | 45.2% | 33.7% |
D5
medium
residues 153-228_261-287
Domain cluster:
rep: pol_protein,_partial__YP_002308474__Simian_T-cell_lymphotropic_virus_6__481147__D16-81_108-143
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03539.20 best | Spuma_A9PTase | 35.2 | 2.00e-08 | 23.3% | 14.7% |
D6
medium
residues 372-517
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17919.8 best | RT_RNaseH_2 | 38.7 | 1.20e-09 | 61.0% | 88.0% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5m1pB00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.70 | 34.0 | 3.15e-01 | 82.2% | 36.0% |
| 3h1qA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 35.0 | 3.45e-01 | 80.8% | 52.3% |
| 1jlcB03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 41.0 | 4.34e-01 | 77.4% | 80.5% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.55 | 29.0 | 3.23e-01 | 78.8% | 62.3% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 29.0 | 3.17e-01 | 84.9% | 68.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941128 | 4967.1.1.19 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › RT_RNaseH_2 | 0.89 | 68.0 | 7.67e-01 | 78.8% | 99.1% |
| 3931852 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.83 | 45.0 | 6.07e-01 | 74.7% | 97.5% |
| 4980282 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.62 | 34.0 | 2.68e-01 | 98.6% | 27.1% |
D7
medium
residues 518-584
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7kseA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 46.0 | 3.66e-01 | 80.6% | 54.1% |
| 3ihmA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 44.0 | 3.20e-01 | 83.6% | 41.9% |
| 2ebfX04 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 41.0 | 2.87e-01 | 80.6% | 45.8% |
| 6i1dA02 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 40.0 | 3.05e-01 | 83.6% | 53.5% |
| 6jtdA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 42.0 | 2.95e-01 | 95.5% | 71.8% |
| 1gteA03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 37.0 | 2.75e-01 | 80.6% | 44.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2771374 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.95 | 73.0 | 5.81e-01 | 83.6% | 44.6% |
| 3934135 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 48.0 | 3.93e-01 | 80.6% | 50.0% |
| 4022567 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 47.0 | 3.84e-01 | 80.6% | 48.1% |
| 3302044 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.62 | 44.0 | 3.07e-01 | 79.1% | 52.3% |
| 3324497 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.62 | 45.0 | 3.86e-01 | 80.6% | 50.4% |
| 2765405 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.61 | 47.0 | 3.78e-01 | 83.6% | 43.3% |
| 3998343 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 45.0 | 4.02e-01 | 80.6% | 56.0% |
| 3507332 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 43.0 | 3.46e-01 | 80.6% | 42.9% |
| 5003192 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.58 | 42.0 | 3.23e-01 | 80.6% | 56.5% |
| 5078948 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.57 | 41.0 | 2.87e-01 | 76.1% | 44.3% |
| 3888095 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.57 | 42.0 | 3.37e-01 | 80.6% | 87.9% |
| 3818469 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.56 | 42.0 | 3.48e-01 | 82.1% | 76.0% |
| 3339080 | 7512.1.1.77 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_N | 0.52 | 39.0 | 2.76e-01 | 85.1% | 45.9% |
| 4998265 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.52 | 37.0 | 2.88e-01 | 77.6% | 67.1% |
| 3490041 | 4104.1.1.0 ↗ | beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like | 0.51 | 38.0 | 3.22e-01 | 82.1% | 61.7% |
D8
medium
residues 1071-1121
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18103.8 best | SH3_11 | 111.2 | 3.00e-32 | 100.0% | 79.4% |
CATH (85)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.94 | 88.0 | 7.78e-01 | 100.0% | 72.9% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 62.0 | 5.62e-01 | 100.0% | 63.8% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.76 | 67.0 | 6.74e-01 | 100.0% | 98.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.75 | 59.0 | 6.07e-01 | 100.0% | 91.7% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 66.0 | 5.45e-01 | 100.0% | 57.0% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 63.0 | 6.38e-01 | 100.0% | 94.1% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 60.0 | 5.64e-01 | 100.0% | 73.0% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 60.0 | 5.52e-01 | 100.0% | 69.7% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.73 | 51.0 | 4.42e-01 | 74.5% | 82.5% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 60.0 | 5.07e-01 | 100.0% | 55.3% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 59.0 | 5.39e-01 | 100.0% | 69.1% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 50.0 | 4.38e-01 | 74.5% | 83.5% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 58.0 | 5.74e-01 | 100.0% | 85.5% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 63.0 | 5.80e-01 | 100.0% | 89.4% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 62.0 | 5.64e-01 | 100.0% | 80.0% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 63.0 | 5.55e-01 | 100.0% | 74.3% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 61.0 | 5.77e-01 | 100.0% | 93.4% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 61.0 | 5.58e-01 | 100.0% | 91.0% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 61.0 | 5.30e-01 | 100.0% | 71.8% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 61.0 | 5.92e-01 | 100.0% | 94.7% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 61.0 | 5.53e-01 | 100.0% | 80.0% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 57.0 | 5.45e-01 | 98.0% | 79.7% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 60.0 | 5.31e-01 | 100.0% | 76.0% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 60.0 | 5.73e-01 | 100.0% | 95.0% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 56.0 | 5.61e-01 | 100.0% | 90.6% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.49e-01 | 100.0% | 98.5% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.60e-01 | 100.0% | 92.2% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.55e-01 | 100.0% | 92.4% |
| 2rqtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.66e-01 | 100.0% | 93.4% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 59.0 | 5.70e-01 | 100.0% | 94.9% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.93e-01 | 100.0% | 98.1% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.67 | 59.0 | 5.54e-01 | 100.0% | 88.9% |
| 1irxA02 | 2.30.30.300 | Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like | 0.67 | 49.0 | 5.15e-01 | 96.1% | 93.0% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 58.0 | 5.50e-01 | 100.0% | 90.5% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 58.0 | 5.42e-01 | 100.0% | 79.0% |
| 2epdA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 58.0 | 5.12e-01 | 100.0% | 71.1% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 58.0 | 5.16e-01 | 100.0% | 81.1% |
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 58.0 | 4.96e-01 | 100.0% | 64.3% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 58.0 | 5.46e-01 | 100.0% | 83.9% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 58.0 | 4.89e-01 | 100.0% | 62.8% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 57.0 | 5.45e-01 | 100.0% | 91.7% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 56.0 | 5.47e-01 | 100.0% | 96.6% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 57.0 | 5.60e-01 | 100.0% | 98.2% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 56.0 | 5.47e-01 | 100.0% | 98.3% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 57.0 | 4.85e-01 | 100.0% | 66.3% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 56.0 | 5.03e-01 | 100.0% | 79.7% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 57.0 | 5.26e-01 | 100.0% | 84.8% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 57.0 | 5.44e-01 | 100.0% | 90.0% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 56.0 | 5.26e-01 | 100.0% | 83.1% |
| 6uy8A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 56.0 | 5.39e-01 | 100.0% | 91.5% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 54.0 | 4.92e-01 | 100.0% | 69.0% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 50.0 | 5.18e-01 | 100.0% | 97.9% |
| 1y0mA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 55.0 | 5.25e-01 | 100.0% | 90.2% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 4.82e-01 | 100.0% | 68.1% |
| 1ri9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 54.0 | 4.81e-01 | 100.0% | 74.0% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 54.0 | 5.07e-01 | 100.0% | 92.2% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 52.0 | 5.09e-01 | 94.1% | 100.0% |
| 3bdlA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 51.0 | 3.54e-01 | 90.2% | 63.3% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 54.0 | 4.98e-01 | 100.0% | 79.4% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 52.0 | 4.83e-01 | 100.0% | 88.2% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 50.0 | 4.59e-01 | 90.2% | 92.5% |
| 1t0hA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 50.0 | 4.14e-01 | 94.1% | 65.6% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 52.0 | 4.77e-01 | 100.0% | 88.6% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 44.0 | 4.49e-01 | 100.0% | 84.0% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 41.0 | 3.71e-01 | 72.5% | 49.3% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 4.59e-01 | 98.0% | 79.3% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.60 | 36.0 | 3.86e-01 | 100.0% | 70.7% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 48.0 | 4.73e-01 | 94.1% | 87.5% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 45.0 | 3.58e-01 | 92.2% | 60.2% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.38e-01 | 98.0% | 83.6% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 48.0 | 4.61e-01 | 100.0% | 80.6% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 46.0 | 3.73e-01 | 92.2% | 69.8% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.57 | 45.0 | 4.24e-01 | 100.0% | 71.2% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 44.0 | 4.49e-01 | 100.0% | 94.0% |
| 1awjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 45.0 | 4.08e-01 | 100.0% | 72.7% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 47.0 | 3.92e-01 | 100.0% | 96.8% |
| 1uirA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.55 | 43.0 | 4.34e-01 | 96.1% | 92.3% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 45.0 | 4.09e-01 | 100.0% | 72.7% |
| 4wh5A00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.55 | 40.0 | 2.88e-01 | 80.4% | 49.4% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.54 | 43.0 | 3.09e-01 | 90.2% | 57.1% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.53 | 42.0 | 4.15e-01 | 94.1% | 87.5% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.53 | 41.0 | 3.73e-01 | 94.1% | 65.8% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.51 | 41.0 | 3.50e-01 | 98.0% | 90.7% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.91e-01 | 100.0% | 59.8% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.42e-01 | 100.0% | 70.5% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 403788 | 4.1.1.100 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_11 | 0.95 | 89.0 | 8.17e-01 | 100.0% | 81.0% |
| 4091771 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 81.0 | 7.67e-01 | 100.0% | 85.0% |
| 3937333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 79.0 | 6.69e-01 | 100.0% | 62.5% |
| 3924760 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 81.0 | 6.55e-01 | 100.0% | 63.3% |
| 3781209 | 4.1.1.308 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31073 | 0.87 | 81.0 | 6.29e-01 | 100.0% | 52.0% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 77.0 | 7.31e-01 | 100.0% | 83.3% |
| 3934126 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 78.0 | 7.42e-01 | 100.0% | 86.7% |
| 3783160 | 4.1.1.308 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31073 | 0.84 | 76.0 | 7.01e-01 | 100.0% | 83.1% |
| 3435006 | 4.1.1.308 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31073 | 0.83 | 76.0 | 6.98e-01 | 100.0% | 86.2% |
| 3840052 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 58.0 | 6.44e-01 | 96.1% | 95.0% |
| 3993250 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.83 | 66.0 | 6.43e-01 | 100.0% | 80.0% |
| 3326132 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 65.0 | 6.01e-01 | 100.0% | 67.7% |
| 3231177 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.81 | 64.0 | 6.48e-01 | 98.0% | 88.0% |
| 3621818 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.81 | 63.0 | 6.44e-01 | 100.0% | 88.0% |
| 3797642 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 66.0 | 4.42e-01 | 100.0% | 24.9% |
| 4024411 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 58.0 | 5.73e-01 | 100.0% | 72.7% |
| 3622389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 65.0 | 6.01e-01 | 100.0% | 70.8% |
| 3929260 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 67.0 | 6.59e-01 | 100.0% | 87.3% |
| 3936726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 68.0 | 6.67e-01 | 100.0% | 89.1% |
| 3502290 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 65.0 | 6.21e-01 | 100.0% | 78.3% |
| 3397846 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 64.0 | 6.22e-01 | 100.0% | 81.8% |
| 4473115 | 4.1.1.5 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e | 0.78 | 63.0 | 5.03e-01 | 100.0% | 45.0% |
| 1032191 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.78 | 63.0 | 5.46e-01 | 100.0% | 58.4% |
| 3523979 | 604.12.1.118 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 | 0.78 | 64.0 | 6.11e-01 | 100.0% | 76.7% |
| 3478898 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 66.0 | 6.08e-01 | 100.0% | 73.8% |
| 3868320 | 4.1.1.65 ↗ | beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor | 0.78 | 64.0 | 5.91e-01 | 100.0% | 70.8% |
| 3510676 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 64.0 | 5.22e-01 | 100.0% | 49.5% |
| 3855972 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.77 | 63.0 | 5.85e-01 | 100.0% | 70.8% |
| 4218142 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.77 | 61.0 | 4.93e-01 | 100.0% | 45.0% |
| 3241817 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 64.0 | 6.14e-01 | 100.0% | 81.7% |
| 3256431 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.76 | 60.0 | 5.12e-01 | 98.0% | 55.0% |
| 3373330 | 4.1.1.337 ↗ | beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II | 0.76 | 61.0 | 5.39e-01 | 100.0% | 61.3% |
| 3533318 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.74 | 59.0 | 5.97e-01 | 100.0% | 90.0% |
| 3372822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 66.0 | 5.80e-01 | 100.0% | 73.3% |
| 3885050 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.73 | 66.0 | 4.46e-01 | 100.0% | 29.1% |
| 3842062 | 4.1.1.91 ↗ | beta barrels › SH3 › SH3 › SH3 › hSH3 | 0.73 | 66.0 | 5.20e-01 | 100.0% | 57.0% |
| 3554995 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 65.0 | 5.85e-01 | 100.0% | 78.6% |
| 3245032 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 64.0 | 5.67e-01 | 100.0% | 88.0% |
| 4929875 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.73 | 60.0 | 4.85e-01 | 100.0% | 48.0% |
| 4134876 | 4.1.1.334 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 | 0.73 | 65.0 | 4.47e-01 | 100.0% | 33.3% |
| 3555931 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.72 | 65.0 | 4.94e-01 | 100.0% | 44.3% |
| 4537356 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.72 | 62.0 | 5.84e-01 | 94.1% | 98.3% |
| 3475240 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.72 | 61.0 | 6.00e-01 | 98.0% | 89.1% |
| 162525 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 63.0 | 5.03e-01 | 100.0% | 53.9% |
| 3907870 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 63.0 | 5.48e-01 | 100.0% | 69.6% |
| 3472332 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 57.0 | 5.60e-01 | 100.0% | 83.6% |
| 3619599 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.71 | 63.0 | 5.56e-01 | 100.0% | 73.3% |
| 3899828 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.71 | 63.0 | 5.44e-01 | 100.0% | 68.8% |
| 3902139 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.71 | 63.0 | 5.70e-01 | 100.0% | 74.3% |
| 3573262 | 4.1.1.91 ↗ | beta barrels › SH3 › SH3 › SH3 › hSH3 | 0.71 | 63.0 | 5.23e-01 | 100.0% | 61.1% |
| 3936885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 58.0 | 5.39e-01 | 98.0% | 73.8% |
| 3275832 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.70 | 62.0 | 6.10e-01 | 100.0% | 92.7% |
| 3899589 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 59.0 | 5.66e-01 | 96.1% | 91.7% |
| 3924338 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 61.0 | 5.54e-01 | 100.0% | 78.6% |
| 3514453 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 61.0 | 5.41e-01 | 100.0% | 73.3% |
| 3498145 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 61.0 | 5.70e-01 | 100.0% | 85.9% |
| 3621642 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.70 | 61.0 | 5.29e-01 | 100.0% | 68.8% |
| 3702915 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 61.0 | 5.84e-01 | 100.0% | 91.7% |
| 3222147 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 61.0 | 5.85e-01 | 100.0% | 85.0% |
| 3513923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 61.0 | 5.42e-01 | 100.0% | 73.3% |
| 3572393 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.70 | 61.0 | 5.53e-01 | 100.0% | 74.3% |
| 3879164 | 4.1.1.91 ↗ | beta barrels › SH3 › SH3 › SH3 › hSH3 | 0.69 | 61.0 | 5.41e-01 | 100.0% | 76.0% |
| 3626531 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 61.0 | 5.06e-01 | 100.0% | 61.1% |
| 3494765 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.69 | 61.0 | 3.99e-01 | 100.0% | 25.0% |
| 3995675 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 61.0 | 5.82e-01 | 100.0% | 95.0% |
| 3873942 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 60.0 | 5.57e-01 | 98.0% | 86.2% |
| 3419491 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 61.0 | 5.84e-01 | 100.0% | 85.0% |
| 3635127 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.69 | 58.0 | 5.62e-01 | 100.0% | 86.7% |
| 4038705 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.69 | 61.0 | 5.62e-01 | 100.0% | 95.4% |
| 3930456 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 61.0 | 5.64e-01 | 100.0% | 78.5% |
| 3413864 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 60.0 | 4.21e-01 | 100.0% | 36.4% |
| 3491137 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 60.0 | 5.72e-01 | 100.0% | 93.3% |
| 3918340 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.68 | 60.0 | 5.41e-01 | 100.0% | 81.4% |
| 3487936 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 5.38e-01 | 100.0% | 78.6% |
| 3600486 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 4.78e-01 | 100.0% | 55.0% |
| 3999508 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 60.0 | 5.41e-01 | 100.0% | 84.3% |
| 3554293 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 60.0 | 5.53e-01 | 100.0% | 86.2% |
| 3496355 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.66e-01 | 96.1% | 96.4% |
| 3479350 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 58.0 | 4.97e-01 | 100.0% | 64.7% |
| 3246255 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 58.0 | 5.29e-01 | 100.0% | 78.6% |
| 3505111 | 4.1.1.318 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26085 | 0.67 | 58.0 | 4.80e-01 | 100.0% | 60.2% |
| 3415045 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 57.0 | 5.21e-01 | 100.0% | 78.6% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.66 | 58.0 | 5.39e-01 | 100.0% | 80.0% |
| 3893368 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.66 | 57.0 | 5.34e-01 | 100.0% | 80.0% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 56.0 | 5.23e-01 | 100.0% | 76.9% |
| 3779830 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.66 | 58.0 | 4.84e-01 | 100.0% | 58.9% |
| 3521739 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.65 | 57.0 | 4.84e-01 | 100.0% | 64.7% |
| 4003717 | 4.1.1.50 ↗ | beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 | 0.65 | 57.0 | 5.06e-01 | 100.0% | 73.3% |
| 5022848 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 5.34e-01 | 100.0% | 83.3% |
| 3556601 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.65 | 57.0 | 5.32e-01 | 100.0% | 81.5% |
| 5063311 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.65 | 48.0 | 5.02e-01 | 98.0% | 97.8% |
| 4300449 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.64 | 55.0 | 5.10e-01 | 100.0% | 76.9% |
| 3573620 | 4.1.1.318 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26085 | 0.63 | 53.0 | 5.05e-01 | 96.1% | 90.0% |
| 5075469 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.62 | 52.0 | 4.85e-01 | 100.0% | 76.9% |
| 3323984 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.61 | 51.0 | 3.59e-01 | 100.0% | 29.7% |
| 5027750 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.55e-01 | 100.0% | 81.8% |
| 4139090 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.59 | 46.0 | 4.61e-01 | 100.0% | 89.1% |
| 5029405 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.59 | 46.0 | 4.61e-01 | 100.0% | 89.1% |
| 1889033 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.59 | 48.0 | 3.12e-01 | 100.0% | 19.1% |
| 3409083 | 220.1.1.46 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 | 0.57 | 47.0 | 3.61e-01 | 100.0% | 75.6% |