poly-A_polymerase_catalytic_subunit_VP55

Euk-Vir

Vaccinia_virus

poly-A_polymerase_catalytic_subunit_VP55__YP_232939__Vaccinia_virus__10245

Identity

83.9 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Orthopoxvirus_vaccinia

TaxID: 10245

View cluster (34 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 131-283_462-478

PDB

Domain cluster: rep: polyA_polymerase_large_subunit__YP_005296237__Cotia_virus_SPAn232__930275__D122-266_453-469

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03296.21 best	Pox_polyA_pol	224.9	4.80e-67	87.6%	99.3%

D2 medium residues 13-116

PDB

Domain cluster: rep: poly-A-_polymerase_catalytic_subunit_VP55__YP_008003861__Adoxophyes_honmai_entomopoxvirus_L__1293540__D11-107

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12630.14 best	Pox_polyA_pol_N	149.3	6.60e-44	100.0%	94.4%

D3 medium residues 284-461

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12629.14 best	Pox_polyA_pol_C	259.5	3.30e-77	100.0%	90.4%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1179386	4945.1.1.1 ↗	a+b complex topology › C-terminal a+b domain in Poly(A) polymerase catalytic subunit › C-terminal a+b domain in Poly(A) polymerase catalytic subunit › C-terminal a+b domain in Poly(A) polymerase catalytic subunit › Pox_polyA_pol_C	0.92	80.0	8.08e-01	88.8%	89.8%
4537687	325.1.7.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif	0.58	22.0	3.45e-01	98.3%	89.2%
3446884	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.53	21.0	3.23e-01	88.2%	90.0%