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polyhedron_envelope_protein_1

Euk-Vir

Erinnyis_ello_granulovirus

polyhedron_envelope_protein_1__YP_009091859__Erinnyis_ello_granulovirus__307444

Identity

Accession:
YP_009091859 ↗
Protein ID:
polyhedron_envelope_protein_1
Kingdom:
euk

Quality

72.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Erinnyis_ello_granulovirus

TaxID: 307444

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-86
PDB
Domain cluster: rep: MK448516.1__QBX10840.1__JavanS490_0006__00006__D2-76
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04512.19 best Baculo_PEP_N 101.8 3.50e-29 93.4% 73.2%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l8rA00 3.10.260.20 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski 0.73 66.0 5.99e-01 100.0% 92.1%
1sbxA00 3.10.260.20 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski 0.70 62.0 5.57e-01 100.0% 86.8%
1bm8A00 3.10.260.10 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain 0.66 58.0 5.33e-01 100.0% 77.8%
1dmuA00 3.40.600.20 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Restriction endonuclease BglI 0.59 49.0 3.39e-01 97.4% 69.9%
1pp8O00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.10e-01 89.5% 63.9%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 37.0 3.96e-01 100.0% 86.4%
6sulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 39.0 3.53e-01 84.2% 75.9%
6fndA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 37.0 2.92e-01 80.3% 51.1%
4ktpB02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.50 32.0 3.19e-01 86.8% 61.0%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.50 36.0 3.28e-01 100.0% 55.9%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.50 41.0 3.41e-01 96.1% 49.6%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.50 40.0 3.23e-01 88.2% 52.3%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968916 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.86 81.0 7.12e-01 100.0% 74.3%
3163642 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.84 79.0 6.84e-01 100.0% 71.8%
4033119 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.79 71.0 6.43e-01 96.1% 73.0%
4998593 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.75 68.0 5.92e-01 100.0% 73.0%
4954530 101.1.9.143 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM 0.75 64.0 5.62e-01 96.1% 85.2%
3529465 101.1.9.4 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno 0.74 67.0 5.99e-01 100.0% 87.6%
3285380 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.72 50.0 4.25e-01 82.9% 44.8%
3525074 101.1.9.4 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno 0.70 62.0 5.91e-01 98.7% 100.0%
3893451 101.1.9.4 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno 0.70 63.0 5.65e-01 100.0% 87.6%
3978692 101.1.9.143 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM 0.70 62.0 5.01e-01 100.0% 64.0%
3785640 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 62.0 5.37e-01 97.4% 87.0%
3480621 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 62.0 5.80e-01 100.0% 96.8%
4003595 101.1.9.4 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno 0.69 62.0 5.23e-01 100.0% 70.5%
3944712 101.1.9.40 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N 0.69 60.0 5.44e-01 97.4% 73.3%
3516620 101.1.9.107 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › PF25867 0.68 60.0 5.57e-01 98.7% 100.0%
3984393 101.1.9.88 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha 0.66 57.0 5.01e-01 94.7% 73.6%
3274594 101.1.9.30 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.64 47.0 3.51e-01 85.5% 30.5%
3400699 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.63 57.0 5.14e-01 100.0% 97.1%
3214527 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.61 55.0 4.63e-01 100.0% 79.2%
3619623 101.1.9.4 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno 0.60 44.0 4.74e-01 100.0% 90.8%
3693848 101.1.9.77 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › PAP1 0.57 42.0 4.50e-01 78.9% 100.0%
5057035 101.1.9.151 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Zn_ribbon_TFIIB 0.54 43.0 4.14e-01 89.5% 88.9%
4951804 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 37.0 3.11e-01 78.9% 90.7%
3974372 206.1.1.17 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.50 43.0 3.13e-01 100.0% 73.6%