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polymerase

Euk-Vir

Apocheima_cinerarium_nucleopolyhedrovirus

polymerase__YP_006607815__Apocheima_cinerarium_nucleopolyhedrovirus__307461

Identity

Accession:
YP_006607815 ↗
Protein ID:
polymerase
Kingdom:
euk

Quality

77.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Apocheima_cinerarium_nucleopolyhedrovirus

TaxID: 307461

Cluster

View cluster (11 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-77_149-191
PDB
Domain cluster: rep: DNA_polymerase__YP_009666761__Mythimna_unipuncta_nucleopolyhedrovirus__447897__D1-67_114-188
D2 medium residues 195-285_331-343
PDB
Domain cluster: rep: DNA-POL__YP_009249947__Mocis_latipes_granulovirus__2072024__D203-221_322-453
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03104.26 best DNA_pol_B_exo1 41.4 1.60e-10 87.5% 37.2%
D3 medium residues 286-313_344-386
PDB
Domain cluster: rep: DNA_polymerase__YP_008378438__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D271-327
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03104.26 best DNA_pol_B_exo1 31.7 1.50e-07 100.0% 30.6%
D4 medium residues 523-609
PDB