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polymerase_basic_subunit_1
Euk-VirOz_virus
polymerase_basic_subunit_1__YP_009553280__Oz_virus__2137161
Identity
- Accession:
- YP_009553280 ↗
- Protein ID:
- polymerase_basic_subunit_1
- Kingdom:
- euk
Quality
67.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Insthoviricetes›
Articulavirales›
Orthomyxoviridae›
Thogotovirus›
Oz_virus
TaxID: 2137161
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-58_116-175_206-232
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00602.23 best | Flu_PB1 | 66.7 | 1.80e-18 | 81.7% | 9.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4859811 | 304.48.1.7 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Flu_PB1 | 0.86 | 81.0 | 5.23e-01 | 98.3% | 39.0% |
| 1695458 | 304.48.1.7 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Flu_PB1 | 0.80 | 74.0 | 4.78e-01 | 99.1% | 41.2% |
| 1411401 | 304.48.1.7 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Flu_PB1 | 0.78 | 73.0 | 4.67e-01 | 99.1% | 42.2% |
| 3240419 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.55 | 24.0 | 3.38e-01 | 71.3% | 88.0% |
| 3620492 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.54 | 25.0 | 3.60e-01 | 73.9% | 98.0% |
D2
medium
residues 295-306_370-409
Domain cluster:
representative
CATH (2)
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4320378 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 47.0 | 2.87e-01 | 100.0% | 66.3% |
| 3673435 | 2002.1.2.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 › Glyco_hydro_14 | 0.54 | 39.0 | 2.93e-01 | 78.8% | 63.4% |