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polymerase_complex_protein
Euk-VirMarburg_marburgvirus
polymerase_complex_protein__YP_009055223__Marburg_marburgvirus__11269
Identity
- Accession:
- YP_009055223 ↗
- Protein ID:
- polymerase_complex_protein
- Kingdom:
- euk
Quality
71.5
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Filoviridae›
Orthomarburgvirus›
Orthomarburgvirus_marburgense
TaxID: 11269
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 210-328
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02097.21 best | Filo_VP35 | 231.4 | 2.30e-68 | 100.0% | 36.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3da1A03 | 1.10.8.870 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Alpha-glycerophosphate oxidase, cap domain | 0.54 | 39.0 | 3.74e-01 | 87.4% | 64.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2389803 | 3288.1.1.1 ↗ | a+b complex topology › Polymerase cofactor VP35 C-terminal RNA binding domain › Polymerase cofactor VP35 C-terminal RNA binding domain › Polymerase cofactor VP35 C-terminal RNA binding domain › Filo_VP35 | 0.92 | 88.0 | 8.63e-01 | 100.0% | 95.2% |
| 3929015 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.65 | 39.0 | 4.27e-01 | 84.9% | 72.6% |
| 4253460 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.53 | 40.0 | 2.90e-01 | 79.8% | 96.3% |
| 4946139 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.52 | 41.0 | 3.00e-01 | 87.4% | 91.0% |
| 3247842 | 2003.1.5.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 | 0.52 | 39.0 | 2.75e-01 | 80.7% | 82.9% |
| 1837200 | 6058.1.1.1 ↗ | alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › DAO_C | 0.51 | 35.0 | 3.51e-01 | 87.4% | 65.6% |
D2
medium
residues 74-158
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02097.21 best | Filo_VP35 | 149.8 | 1.50e-43 | 100.0% | 24.9% |