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polynucleotide_kinase-3-phosphatase

Euk-Vir

Phaeocystis_globosa_virus

polynucleotide_kinase-3-phosphatase__YP_008052398__Phaeocystis_globosa_virus__251749

Identity

Accession:
YP_008052398 ↗
Protein ID:
polynucleotide_kinase-3-phosphatase
Kingdom:
euk

Quality

78.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prymnesiovirus› Phaeocystis_globosa_virus

TaxID: 251749

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-164
PDB
Domain cluster: representative
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF13419.13 best HAD_2 33.9 4.40e-08 93.2% 51.7%
PF08645.18 PNK3P 129.0 2.00e-37 87.7% 98.8%
PF03031.25 NIF 23.4 5.80e-05 55.2% 44.4%
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u7eB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.90 87.0 8.03e-01 100.0% 93.4%
4xrpA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.77 59.0 6.63e-01 85.3% 100.0%
1cqzB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.77 59.0 6.40e-01 87.7% 94.8%
1u7pD00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.73 62.0 6.28e-01 89.0% 91.3%
3ed5A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 58.0 6.15e-01 88.3% 92.5%
2om6A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 61.0 6.33e-01 88.3% 93.5%
4fypB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 61.0 5.45e-01 89.0% 67.0%
1cqzA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 60.0 6.08e-01 87.7% 95.1%
4ex6A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 61.0 6.39e-01 89.6% 95.4%
3lk7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 39.0 5.15e-01 82.2% 100.0%
7bvaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 41.0 5.26e-01 85.3% 100.0%
3ewiB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.70 59.0 6.06e-01 89.0% 91.1%
3mmzC00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 59.0 5.92e-01 88.3% 88.3%
3e8mA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 58.0 5.88e-01 88.3% 87.8%
2cftA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 59.0 5.84e-01 88.3% 87.0%
4navA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 57.0 5.54e-01 88.3% 79.0%
1nrwA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.67 56.0 5.79e-01 87.7% 96.8%
3m1yC01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.66 56.0 5.86e-01 89.0% 95.9%
3fvvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.66 56.0 5.88e-01 89.0% 98.6%
1yqeA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.65 37.0 4.63e-01 89.0% 92.7%
1vbkA03 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 46.0 5.00e-01 89.6% 88.0%
1pjqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 41.0 4.81e-01 89.0% 91.1%
4u63A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 49.0 4.80e-01 89.6% 73.0%
4eyeA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 44.0 4.52e-01 89.0% 72.4%
1s2oA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.63 54.0 5.32e-01 89.6% 93.6%
2gfqA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.61 34.0 4.38e-01 87.7% 98.9%
3gmsA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 44.0 4.98e-01 89.0% 96.8%
3qyfA01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.60 51.0 5.12e-01 90.2% 93.9%
3olqA00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 51.0 4.11e-01 89.6% 49.7%
3s3tA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 49.0 5.21e-01 87.7% 97.9%
3szuA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.59 37.0 4.45e-01 70.6% 99.0%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 43.0 3.95e-01 88.3% 56.9%
2pg3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 49.0 4.41e-01 89.0% 100.0%
3nvaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 4.00e-01 88.3% 72.6%
1dk7A00 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.58 41.0 4.37e-01 98.2% 81.5%
3u49D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 4.30e-01 90.2% 89.7%
2qw5A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.58 49.0 3.88e-01 90.2% 93.9%
4a0sA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 48.0 5.05e-01 89.0% 96.6%
2b5xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 43.0 4.50e-01 98.2% 85.1%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 46.0 4.96e-01 89.0% 100.0%
7uuim01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 46.0 4.73e-01 84.7% 91.8%
3me8B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 45.0 4.58e-01 100.0% 84.6%
2l5oA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 41.0 4.31e-01 98.2% 80.7%
2nx2A00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 47.0 4.60e-01 88.3% 96.1%
3ntvA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 44.0 4.05e-01 81.0% 87.1%
2ehdA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 47.0 4.37e-01 89.0% 90.8%
6gc1A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 43.0 4.12e-01 98.2% 68.1%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 35.0 3.85e-01 72.4% 76.3%
4dqlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.56 46.0 4.68e-01 87.7% 93.8%
3erwF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 41.0 4.50e-01 97.5% 93.9%
3d02A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 43.0 4.43e-01 80.4% 95.4%
2yk4A01 3.30.370.20 Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › 0.56 30.0 3.88e-01 79.1% 98.8%
4bpyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 43.0 4.36e-01 100.0% 80.4%
2k6vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 44.0 4.36e-01 100.0% 79.1%
8oqkA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 35.0 4.21e-01 81.6% 100.0%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 33.0 3.76e-01 71.2% 80.5%
5dxfB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 46.0 3.90e-01 89.6% 90.8%
4fe7A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 41.0 4.32e-01 79.1% 97.9%
3phhA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 38.0 4.22e-01 88.3% 92.3%
7zllA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 43.0 3.68e-01 87.7% 85.8%
2gruA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 41.0 4.06e-01 81.0% 87.1%
2pzmB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 3.56e-01 89.0% 66.8%
1jztA00 3.40.50.10260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain 0.53 44.0 3.87e-01 89.6% 66.7%
5u4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 3.57e-01 89.0% 70.4%
3mfqA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.53 36.0 3.95e-01 70.6% 98.5%
7pcrA01 3.40.50.10710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase 0.52 42.0 4.31e-01 87.7% 90.2%
6r8gA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 4.58e-01 87.7% 100.0%
1wp0A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 44.0 4.44e-01 97.5% 91.3%
1fobA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 41.0 3.29e-01 83.4% 77.8%
6k6wC01 3.40.50.10710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase 0.52 40.0 4.20e-01 85.3% 89.9%
4f2gA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.51 38.0 4.02e-01 88.3% 88.7%
1jndA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 42.0 3.46e-01 87.7% 99.0%
4hxfB02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 47.0 3.96e-01 100.0% 91.8%
6oibA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 35.0 3.60e-01 74.8% 74.8%
2hnhA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 42.0 3.61e-01 90.8% 89.3%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3183066 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.92 88.0 7.38e-01 100.0% 94.9%
4000996 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.91 87.0 8.09e-01 98.8% 91.8%
3800958 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.91 88.0 8.14e-01 100.0% 92.8%
3743831 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.91 88.0 8.33e-01 100.0% 93.0%
4014255 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.91 87.0 7.65e-01 100.0% 95.1%
3400516 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.90 87.0 8.02e-01 100.0% 93.0%
3696327 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.90 86.0 7.58e-01 99.4% 95.1%
3782392 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.89 85.0 7.71e-01 100.0% 99.5%
3609366 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.88 84.0 7.06e-01 100.0% 81.6%
3450611 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.87 67.0 6.77e-01 78.5% 91.9%
3673640 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.84 80.0 7.29e-01 100.0% 94.6%
3597555 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.84 79.0 6.95e-01 100.0% 95.2%
4978223 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.80 67.0 5.90e-01 87.7% 98.3%
5064861 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.79 67.0 5.72e-01 88.3% 94.7%
3713871 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.78 67.0 5.46e-01 89.0% 95.4%
4991597 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.78 66.0 5.82e-01 88.3% 97.4%
3574816 2006.1.1.44 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.78 66.0 5.73e-01 88.3% 93.8%
5075956 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.78 65.0 5.66e-01 86.5% 96.2%
4994385 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.78 66.0 5.81e-01 88.3% 97.8%
5013296 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.78 66.0 5.70e-01 88.3% 92.1%
3236758 2006.1.1.44 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.78 66.0 5.74e-01 88.3% 97.4%
5078294 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.78 66.0 5.82e-01 88.3% 95.1%
4991789 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.77 66.0 5.59e-01 89.6% 94.8%
4999519 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.76 65.0 5.62e-01 89.6% 94.3%
5077545 2006.1.1.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like 0.76 63.0 5.42e-01 86.5% 97.1%
4994524 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.75 64.0 5.69e-01 89.0% 92.9%
5079773 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.75 63.0 5.65e-01 88.3% 95.5%
3414575 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.75 63.0 5.27e-01 88.3% 78.9%
5075239 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.74 63.0 5.67e-01 87.7% 97.7%
4020567 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.74 63.0 5.42e-01 89.0% 94.7%
5000079 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.74 63.0 5.50e-01 88.3% 93.4%
3874542 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.72 61.0 5.41e-01 88.3% 92.4%
1554527 2006.1.1.46 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, HAD_2 0.72 61.0 5.40e-01 88.3% 92.0%
4992093 2006.1.1.43 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_PNKP 0.71 60.0 6.28e-01 88.3% 97.3%
4116615 2003.1.8.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.69 42.0 5.23e-01 87.1% 98.0%
169351 2006.1.1.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.69 58.0 5.87e-01 88.3% 87.8%
4451463 4978.1.1.1 ↗ a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase 0.66 38.0 4.70e-01 90.2% 92.9%
5010573 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.65 48.0 5.27e-01 87.7% 92.6%
4982374 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.64 44.0 4.50e-01 100.0% 70.6%
5078411 7592.1.1.6 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N 0.62 49.0 5.26e-01 89.0% 95.7%
None — 0.62 52.0 4.85e-01 89.0% 75.0%
4944697 7514.1.1.8 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › DHODB_Fe-S_bind 0.61 47.0 4.90e-01 88.3% 87.3%
4028676 2006.1.1.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P 0.61 47.0 5.17e-01 87.1% 96.3%
5068659 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.61 51.0 4.90e-01 90.2% 83.2%
4951857 7512.1.1.32 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.60 50.0 4.83e-01 94.5% 79.4%
3511061 2005.1.1.36 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.60 47.0 4.80e-01 87.7% 84.4%
4943110 2005.1.1.111 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › GMP_synt_C 0.60 50.0 4.66e-01 89.0% 75.0%
5038596 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.60 42.0 4.46e-01 97.5% 82.1%
5051848 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.59 49.0 3.97e-01 89.0% 70.6%
3263231 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.59 48.0 4.23e-01 87.7% 92.4%
4310954 7512.1.1.8 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.59 49.0 4.50e-01 89.0% 89.5%
4667956 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.58 49.0 4.91e-01 90.2% 88.5%
4395650 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.58 46.0 4.07e-01 89.0% 56.8%
4322077 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.58 47.0 4.24e-01 89.0% 62.7%
4964761 2485.1.1.31 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Redoxin 0.58 43.0 4.50e-01 97.5% 83.3%
11344 2485.1.1.4 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.57 43.0 4.56e-01 98.2% 88.1%
4351211 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.57 48.0 4.06e-01 89.0% 57.7%
4942040 2485.1.1.4 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.57 43.0 4.21e-01 98.2% 71.7%
4484951 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.57 47.0 4.05e-01 89.0% 57.7%
1117756 7590.1.1.0 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.57 41.0 3.87e-01 89.0% 63.2%
170031 2485.1.1.4 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.56 41.0 4.44e-01 96.3% 91.0%
4180687 2005.1.1.23 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.56 46.0 4.28e-01 88.3% 77.6%
4203886 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.56 47.0 4.00e-01 89.0% 57.7%
3969215 2485.1.1.12 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.56 45.0 4.34e-01 100.0% 75.6%
5060340 2003.1.1.72 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd 0.56 46.0 3.72e-01 89.0% 72.4%
4469853 2485.1.1.12 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.55 44.0 4.30e-01 100.0% 75.0%
3411706 7514.1.1.1 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.55 45.0 4.43e-01 86.5% 86.8%
4079208 7512.1.1.9 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › LpxB 0.55 49.0 4.52e-01 95.7% 78.5%
3744163 2003.1.5.95 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM13 0.55 45.0 3.65e-01 89.0% 71.7%
3964585 2485.1.1.12 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.54 44.0 4.41e-01 100.0% 83.6%
3699008 2004.1.1.23 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.54 42.0 3.63e-01 81.6% 67.3%
5054560 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.54 45.0 4.19e-01 89.0% 80.8%
3659669 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.54 45.0 4.00e-01 89.6% 84.3%
5073395 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.53 44.0 4.12e-01 89.0% 98.5%
3529503 7555.1.1.1 ↗ a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.53 45.0 3.82e-01 95.1% 90.3%
5035814 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.52 43.0 3.56e-01 89.0% 53.8%
3598082 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 44.0 3.75e-01 96.9% 56.2%
3718583 2485.1.1.12 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.52 44.0 3.84e-01 96.9% 60.4%
4217774 7516.1.1.3 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2,Glyco_transf_7C 0.50 45.0 2.85e-01 99.4% 27.0%
D2 high residues 185-314
PDB
Domain cluster: rep: LacPavin_0818_WC45_scaffold_30120_prodigal-single.1__X__X__00032__D47-218
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF08433.17 best KTI12 24.1 3.20e-05 95.4% 51.3%
PF13671.13 AAA_33 51.8 1.60e-13 91.5% 99.3%
PF00004.36 AAA 21.5 3.90e-04 78.5% 55.7%