polyprotein_P2a2b

Euk-Vir

Rottboellia_yellow_mottle_virus

polyprotein_P2a2b__YP_009142784__Rottboellia_yellow_mottle_virus__1432563

Identity

80.1 mean pLDDT

View cluster (4 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-53

PDB

D2 medium residues 118-133_234-323

PDB

Domain cluster: rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618

D3 medium residues 134-233

PDB

Domain cluster: rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413

D4 medium residues 324-383

PDB

D5 medium residues 405-466_544-624

PDB

Domain cluster: rep: replicase_polyprotein__YP_009465710__Pepper_enamovirus__2073163__D698-776_892-917

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	31.7	1.10e-07	74.1%	19.6%

D6 medium residues 478-501_513-543_625-661_698-759

PDB

Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	41.6	1.20e-10	40.9%	17.2%
PF02123.22	RdRP_4	33.1	4.20e-08	35.1%	9.5%

D7 medium residues 502-512_662-697_760-839

PDB

Domain cluster: rep: polyprotein_P2a-P2b__YP_009140472__Cymbidium_chlorotic_mosaic_virus__1602124__D662-698_766-823

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	81.9	7.00e-23	68.5%	20.6%

D8 medium residues 840-879

PDB

Domain cluster: rep: uncovered_polypeptide_polyprotein_P2ab__YP_004869651_402-963__Soybean_yellow_common_mosaic_virus__1080798__D446-486