←Back to structures

polyprotein_P2a2b

Euk-Vir

Solanum_nodiflorum_mottle_virus

polyprotein_P2a2b__YP_009344991__Solanum_nodiflorum_mottle_virus__12471

Identity

Accession:
YP_009344991 ↗
Protein ID:
polyprotein_P2a2b
Kingdom:
euk

Quality

73.0 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Sobelivirales› Solemoviridae› Sobemovirus› Solanum_nodiflorum_mottle_virus

TaxID: 12471

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-51
PDB
D2 medium residues 119-136_224-304
PDB
Domain cluster: rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
D3 medium residues 137-223
PDB
Domain cluster: rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413
D4 medium residues 472-493_525-645
PDB
Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02123.22 best RdRP_4 49.3 5.40e-13 95.8% 27.3%
D5 medium residues 494-524_646-821
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02123.22 best RdRP_4 163.5 1.20e-47 98.1% 51.6%