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polyprotein_P2a
Euk-VirRottboellia_yellow_mottle_virus
polyprotein_P2a__YP_009142785__Rottboellia_yellow_mottle_virus__1432563
Identity
- Accession:
- YP_009142785 ↗
- Protein ID:
- polyprotein_P2a
- Kingdom:
- euk
Quality
67.9
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-63
D2
medium
residues 115-134_233-322
Domain cluster:
rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
D3
medium
residues 135-232
D4
medium
residues 323-391
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3uh9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 44.0 | 3.63e-01 | 84.1% | 94.0% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 45.0 | 3.96e-01 | 87.0% | 75.0% |
| 1cjxA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 38.0 | 3.04e-01 | 71.0% | 65.3% |
| 1nkiA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 43.0 | 3.61e-01 | 92.8% | 91.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942097 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.55 | 44.0 | 3.22e-01 | 94.2% | 93.2% |
| 4983333 | 7541.1.1.1 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth | 0.54 | 36.0 | 2.93e-01 | 71.0% | 86.0% |
| 4927417 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.54 | 43.0 | 3.12e-01 | 94.2% | 87.9% |
| 4517006 | 2011.2.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › tRNA_deacylase | 0.53 | 37.0 | 2.79e-01 | 73.9% | 57.9% |
| 3612607 | 316.1.1.25 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap_D4 | 0.53 | 42.0 | 3.34e-01 | 91.3% | 82.3% |
| 3621464 | 62.1.1.0 ↗ | beta meanders › Carbonic anhydrase › Carbonic anhydrase › Carbonic anhydrase | 0.51 | 40.0 | 2.80e-01 | 88.4% | 89.1% |
| 3944466 | 211.1.1.10 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_5 | 0.51 | 39.0 | 3.17e-01 | 87.0% | 70.3% |