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polyprotein

Euk-Vir

Brazoran_virus

polyprotein__YP_008400137__Brazoran_virus__1368616

Identity

Accession:: YP_008400137 ↗
Protein ID:: polyprotein
Kingdom:: euk

Quality

74.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Brazoran_virus

TaxID: 1368616

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 176-331

PDB

Domain cluster: rep: polyprotein__YP_009666976__San_Angelo_virus__45767__D199-326

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	197.2	4.70e-58	80.8%	44.8%

D2 medium residues 492-582

PDB

D3 medium residues 583-731

PDB

Domain cluster: rep: M_polyprotein__YP_009666885__Jamestown_Canyon_virus__35511__D547-717

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	54.2	1.20e-14	98.0%	15.4%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ciyA01	1.20.190.10	Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain	0.52	41.0	3.65e-01	83.9%	67.9%
2g2dA00	1.20.1200.10	Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like	0.52	42.0	4.12e-01	86.6%	96.9%
1yhuB00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	40.0	4.12e-01	86.6%	86.1%
3c18A02	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.51	37.0	4.07e-01	75.2%	92.4%
4r42A01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.51	38.0	3.57e-01	77.2%	89.3%
5kdiA00	1.10.3520.10	Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein	0.51	43.0	3.86e-01	92.6%	99.5%
2wy4A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.50	39.0	4.03e-01	87.2%	87.8%
1ngkB00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.50	39.0	4.21e-01	89.3%	96.9%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2504457	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.88	75.0	6.41e-01	89.3%	59.3%
2504456	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.84	79.0	6.53e-01	100.0%	60.2%
2504455	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.82	76.0	6.39e-01	98.7%	61.3%
3631429	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.51	34.0	3.36e-01	85.9%	61.9%
2849693	1075.4.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane	0.51	39.0	3.05e-01	79.2%	87.1%

D4 medium residues 732-824

PDB

Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	34.7	9.10e-09	98.9%	9.9%

D5 medium residues 843-910

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	42.2	5.00e-11	100.0%	7.8%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2q18X01	3.10.330.40	Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 ›	0.60	51.0	5.05e-01	95.6%	100.0%
1ckmA01	3.30.470.30	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme	0.59	41.0	3.14e-01	72.1%	91.0%
3vcaA02	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.59	46.0	3.95e-01	89.7%	81.5%
2vxtI00	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.57	48.0	3.81e-01	98.5%	100.0%
2fb7A00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.56	48.0	4.61e-01	97.1%	87.5%
4hcsA00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.53	39.0	3.98e-01	100.0%	80.6%
2rcnA01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.52	36.0	3.81e-01	82.4%	82.0%
7w0aA02	2.170.260.10	Mainly Beta › Beta Complex › paz domain › paz domain	0.51	42.0	3.50e-01	94.1%	84.8%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4614224	2.1.1.60 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N	0.63	41.0	4.67e-01	89.7%	92.0%
3942731	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.60	47.0	4.32e-01	85.3%	96.7%
3974846	4.11.1.1 ↗	beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24	0.60	44.0	3.79e-01	95.6%	49.1%
4532808	2.1.1.60 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N	0.57	37.0	4.14e-01	80.9%	90.0%
5033699	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.53	40.0	3.40e-01	82.4%	71.3%
5051419	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.52	38.0	4.17e-01	79.4%	100.0%
2127467	2.1.1.2 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2	0.52	37.0	3.36e-01	77.9%	59.2%
4038412	325.1.7.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif	0.51	36.0	3.69e-01	76.5%	89.2%

D6 medium residues 943-1014_1104-1131

PDB

Domain cluster: rep: polyprotein__YP_009666984__Potosi_virus__273360__D951-1029_1099-1130

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	83.3	1.90e-23	73.0%	8.4%

D7 medium residues 1015-1103_1132-1241

PDB

Domain cluster: rep: polyprotein__YP_009507882__Kairi_virus__80939__D1016-1096_1138-1232

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	141.2	6.10e-41	58.3%	13.5%
PF03557.22	Bunya_G1	150.7	8.30e-44	46.2%	10.5%

D8 medium residues 1242-1363

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009664619__Gouleako_virus__603003__D815-896

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	132.8	2.10e-38	100.0%	14.4%