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polyprotein

Euk-Vir

Murrumbidgee_virus

polyprotein__YP_008709777__Murrumbidgee_virus__1406134

Identity

Accession:: YP_008709777 ↗
Protein ID:: polyprotein
Kingdom:: euk

Quality

72.5 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Murrumbidgee_virus

TaxID: 1406134

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 690-775

PDB

Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	43.3	2.40e-11	100.0%	9.8%

D2 high residues 955-1033_1079-1169

PDB

Domain cluster: rep: polyprotein__YP_009507882__Kairi_virus__80939__D1016-1096_1138-1232

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	126.7	1.40e-36	54.1%	10.1%
PF03557.22	Bunya_G1	148.6	3.50e-43	48.8%	9.3%

D3 medium residues 21-138

PDB

Domain cluster: rep: Glycoprotein_precursor__YP_010086209__Caimito_virus__2572766__D29-112

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	114.9	5.60e-33	100.0%	41.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3734689	244.1.1.6 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase	0.54	37.0	2.45e-01	70.3%	44.2%

D4 medium residues 228-326

PDB

Domain cluster: rep: polyprotein__YP_009666976__San_Angelo_virus__45767__D199-326

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	106.1	2.80e-30	74.8%	26.3%

D5 medium residues 327-381

PDB

D6 medium residues 382-451

PDB

Domain cluster: rep: polyprotein__YP_010085086__Anadyr_virus__1642852__D388-431_446-465

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5sviB00	3.30.40.100	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 ›	0.52	36.0	3.99e-01	85.7%	98.1%
1m5q102	3.30.310.60	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Like-Sm ribonucleoprotein, C-terminal domain	0.50	29.0	3.11e-01	87.1%	67.2%

D7 medium residues 452-559

PDB

D8 medium residues 787-850

PDB

Domain cluster: representative

CATH (27)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4bpnW02	2.40.50.740	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain	0.64	45.0	4.90e-01	78.1%	92.2%
3j7aF02	2.40.50.740	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain	0.63	44.0	4.83e-01	79.7%	92.2%
2q18X01	3.10.330.40	Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 ›	0.63	53.0	5.17e-01	93.8%	100.0%
6my0A02	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.59	48.0	4.87e-01	96.9%	87.7%
8bs9A01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.59	35.0	2.23e-01	95.3%	12.7%
1y71A00	2.30.30.430	Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain	0.58	51.0	4.24e-01	95.3%	56.0%
2x5cA01	3.30.70.3590	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.58	40.0	3.58e-01	98.4%	50.5%
2mm0A00	2.10.70.110	Mainly Beta › Ribbon › Complement Module; domain 1 ›	0.57	37.0	3.73e-01	84.4%	65.6%
3vcaA02	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.56	44.0	3.71e-01	89.1%	79.8%
5ajiB02	2.30.30.60	Mainly Beta › Roll › SH3 type barrels. ›	0.56	39.0	4.16e-01	95.3%	94.0%
2b1xA02	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.55	43.0	3.57e-01	89.1%	79.4%
1g2bA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.54	40.0	4.13e-01	79.7%	91.9%
4b6eB01	2.40.10.120	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.54	37.0	2.63e-01	92.2%	22.8%
1pfsA00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.53	38.0	3.68e-01	78.1%	87.2%
1w1hD00	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.53	45.0	3.64e-01	100.0%	59.1%
4hcsA00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.53	41.0	4.06e-01	100.0%	80.6%
7q04F01	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.52	39.0	3.38e-01	82.8%	89.9%
4iupB01	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.52	40.0	4.10e-01	93.8%	90.3%
2zylA01	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.52	39.0	3.20e-01	85.9%	69.6%
3gkeA01	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.52	40.0	3.34e-01	90.6%	71.5%
2dk7A00	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.52	43.0	4.12e-01	96.9%	80.8%
7ylsB01	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.51	39.0	3.41e-01	87.5%	89.8%
3zx7A02	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.51	40.0	3.29e-01	92.2%	97.1%
1r8oB01	2.30.30.480	Mainly Beta › Roll › SH3 type barrels. ›	0.51	38.0	3.82e-01	79.7%	87.9%
3t8qB01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.51	44.0	3.70e-01	100.0%	97.4%
3tssA02	2.40.50.110	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.51	38.0	3.71e-01	82.8%	90.1%
4chmB00	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.50	43.0	3.49e-01	96.9%	72.6%

ECOD (29)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4620172	11.9.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase	0.67	56.0	3.63e-01	93.8%	67.2%
1606334	4.10.1.0 ↗	beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain	0.63	53.0	5.16e-01	93.8%	97.2%
3878271	101.1.2.284 ↗	alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd	0.62	48.0	3.65e-01	96.9%	34.8%
3974596	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.61	38.0	4.03e-01	82.8%	72.7%
4559371	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.59	45.0	4.62e-01	95.3%	87.3%
5036621	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.58	41.0	4.30e-01	96.9%	89.1%
4220126	4.1.1.97 ↗	beta barrels › SH3 › SH3 › SH3 › DUF150_C	0.56	46.0	4.28e-01	95.3%	71.8%
1394279	325.1.6.2 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23	0.55	44.0	3.32e-01	89.1%	54.0%
3971219	11.9.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase	0.55	47.0	3.13e-01	95.3%	63.6%
4078162	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	45.0	4.37e-01	95.3%	85.1%
3625264	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	45.0	4.02e-01	96.9%	85.3%
4197937	223.1.1.24 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8	0.54	39.0	3.20e-01	78.1%	59.2%
3709736	5.1.4.238 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048	0.53	45.0	2.84e-01	96.9%	82.1%
4119875	325.1.7.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif	0.53	37.0	3.73e-01	73.4%	89.2%
3278614	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.53	41.0	3.33e-01	89.1%	73.6%
3576940	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	43.0	3.06e-01	95.3%	36.0%
4406661	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.53	41.0	3.28e-01	90.6%	72.0%
5005032	4.1.1.13 ↗	beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd	0.53	38.0	3.78e-01	93.8%	74.3%
4281699	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	43.0	4.14e-01	93.8%	82.7%
3179184	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.52	37.0	3.41e-01	78.1%	94.4%
3958009	66.1.1.0 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain	0.51	40.0	3.16e-01	89.1%	68.7%
3454464	60.1.2.2 ↗	beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C	0.51	43.0	2.76e-01	92.2%	49.2%
3387984	2.1.1.7 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1	0.51	38.0	3.57e-01	82.8%	68.2%
3739822	12.3.1.9 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_81	0.51	39.0	2.64e-01	89.1%	26.1%
4349950	325.1.7.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif	0.51	35.0	3.60e-01	73.4%	95.0%
4961284	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.51	40.0	3.06e-01	87.5%	67.9%
4120506	243.11.1.4 ↗	a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein › PF29632	0.51	42.0	3.97e-01	100.0%	77.5%
4654223	2.1.1.7 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1	0.50	38.0	3.50e-01	82.8%	90.6%
4162129	60.1.2.2 ↗	beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C	0.50	44.0	2.87e-01	98.4%	52.8%

D9 medium residues 1190-1287

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009664619__Gouleako_virus__603003__D815-896

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	93.4	1.70e-26	100.0%	11.3%

D10 medium residues 1302-1371

PDB