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polyprotein

Euk-Vir

Ambe_virus

polyprotein__YP_009346018__Ambe_virus__1926500

Identity

Accession:: YP_009346018 ↗
Protein ID:: polyprotein
Kingdom:: euk

Quality

75.8 mean pLDDT

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-154

PDB

Domain cluster: rep: polyprotein__YP_009346022__Tapara_virus__1926501__D16-129

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07246.16 best	Phlebovirus_NSM	59.0	7.20e-16	97.7%	44.3%

D2 medium residues 324-479

PDB

Domain cluster: rep: Glycoproteins_G1_and_G2_precursor__YP_089671__Sandfly_fever_Naples_virus__206160__D318-463

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07243.17 best	Phlebovirus_G1	146.2	1.60e-42	100.0%	27.8%

D3 medium residues 651-739

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009304994__Wenzhou_Shrimp_Virus_1__1608095__D240-325

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07243.17 best	Phlebovirus_G1	125.5	3.10e-36	100.0%	16.9%

D4 medium residues 740-758_1315-1359

PDB

Domain cluster: rep: polyprotein__YP_010086061__Salehabad_virus__904699__D703-728_1285-1337

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19019.7 best	Phlebo_G2_C	46.9	3.60e-12	89.1%	26.9%

D5 medium residues 888-934_1023-1070_1158-1202

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009505328__Badu_phasivirus__1980609__D739-805_894-940_1051-1072

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4hj1A01	2.60.98.50	Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 ›	0.80	76.0	7.12e-01	100.0%	85.5%
1rerA01	2.60.98.10	Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1	0.71	59.0	6.16e-01	92.9%	96.8%
1ae2A00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.55	27.0	3.42e-01	90.0%	75.6%
2vf9A00	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.51	28.0	2.87e-01	85.7%	52.7%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1839942	5090.1.1.5 ↗	beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Phlebovirus_G2	0.83	79.0	5.78e-01	100.0%	92.9%
5008207	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.80	46.0	5.94e-01	92.1%	98.8%
2772148	5090.1.1.5 ↗	beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Phlebovirus_G2	0.75	65.0	4.86e-01	92.9%	91.0%
5029179	5090.1.1.0 ↗	beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains	0.72	52.0	5.80e-01	87.9%	92.7%
406733	5090.1.1.3 ↗	beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Alpha_E1_glycop	0.72	65.0	5.01e-01	96.4%	99.7%
3938228	5090.1.1.8 ↗	beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF	0.70	62.0	4.59e-01	94.3%	88.1%
5010618	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.63	30.0	4.24e-01	92.1%	98.4%
3928764	11.1.1.53 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON	0.61	38.0	4.38e-01	97.9%	84.8%
3595817	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.53	28.0	3.18e-01	85.7%	65.5%
4479763	274.1.1.0 ↗	a+b two layers › Pili subunits › Pili subunits › Pili subunits	0.53	30.0	3.64e-01	77.1%	84.2%
3953766	222.1.1.0 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase	0.51	36.0	3.27e-01	72.9%	88.1%
5046300	295.1.1.0 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain	0.51	27.0	3.38e-01	82.1%	84.7%
3250629	4210.1.1.1 ↗	a+b two layers › WGR domain › WGR domain › WGR domain › WGR	0.50	32.0	3.62e-01	71.4%	84.8%

D6 medium residues 935-949_1071-1157

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009305144__Yichang_Insect_virus__1608144__D660-672_720-821

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07245.17 best	Phlebovirus_G2	26.2	5.30e-06	95.1%	25.1%

D7 medium residues 1203-1314

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009666331__Mukawa_virus__1569922__D875-994

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19019.7 best	Phlebo_G2_C	142.8	1.20e-41	100.0%	64.3%