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polyprotein

Euk-Vir

Lukuni_virus

polyprotein__YP_009507860__Lukuni_virus__1678227

Identity

Accession:
YP_009507860 ↗
Protein ID:
polyprotein
Kingdom:
euk

Quality

72.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Lukuni_virus

TaxID: 1678227

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 807-878
PDB
Domain cluster: rep: polyprotein__YP_008709777__Murrumbidgee_virus__1406134__D787-850
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 57.7 1.00e-15 100.0% 8.0%
D2 medium residues 25-111
PDB
Domain cluster: rep: Glycoprotein_precursor__YP_010086209__Caimito_virus__2572766__D29-112
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03563.19 best Bunya_G2 71.4 1.00e-19 100.0% 30.6%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 51.0 4.03e-01 90.8% 81.8%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 50.0 4.08e-01 88.5% 92.1%
2zfdB00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.60 49.0 4.47e-01 88.5% 76.7%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 49.0 3.93e-01 87.4% 85.9%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 48.0 3.97e-01 87.4% 90.2%
5e4bA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 50.0 3.94e-01 90.8% 86.4%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 49.0 3.92e-01 89.7% 89.3%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 49.0 3.89e-01 89.7% 81.4%
1fm4A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 49.0 3.98e-01 89.7% 88.7%
1hxdA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 48.0 3.72e-01 89.7% 59.9%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 48.0 3.97e-01 88.5% 88.1%
4frwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 4.31e-01 92.0% 72.9%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 3.92e-01 88.5% 91.4%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.58 47.0 3.68e-01 88.5% 76.6%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.57 47.0 4.33e-01 89.7% 76.5%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 46.0 3.47e-01 90.8% 88.8%
3nqnA00 3.30.530.70 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 0.56 45.0 3.79e-01 87.4% 92.7%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.56 45.0 3.42e-01 88.5% 65.9%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 45.0 3.77e-01 86.2% 90.3%
4of8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.27e-01 90.8% 73.8%
1tw0A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 45.0 3.74e-01 89.7% 89.2%
1w96C04 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.55 44.0 3.24e-01 89.7% 59.0%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.85e-01 88.5% 67.0%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.53 43.0 4.53e-01 88.5% 97.5%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 41.0 3.22e-01 89.7% 89.9%
4i6yA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.52 43.0 3.99e-01 90.8% 85.5%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 41.0 3.55e-01 89.7% 93.2%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.55e-01 89.7% 68.5%
4ncbA01 3.30.530.60 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.51 40.0 3.44e-01 86.2% 80.1%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 37.0 2.59e-01 77.0% 46.2%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 41.0 3.03e-01 89.7% 84.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3937238 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.65 53.0 3.95e-01 88.5% 80.0%
3748213 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.65 53.0 3.71e-01 88.5% 56.8%
3284176 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 54.0 4.83e-01 89.7% 91.7%
3781788 222.1.1.27 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 0.65 44.0 3.58e-01 70.1% 50.9%
3170490 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.65 54.0 3.93e-01 89.7% 73.0%
3175912 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.64 53.0 4.04e-01 89.7% 82.5%
3781076 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.64 53.0 4.07e-01 89.7% 85.1%
3255874 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.64 52.0 4.03e-01 89.7% 81.0%
3782223 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.63 52.0 3.80e-01 88.5% 68.0%
3437556 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.63 52.0 4.02e-01 89.7% 84.2%
2142144 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.63 52.0 3.95e-01 89.7% 82.5%
3336175 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.61 51.0 3.94e-01 90.8% 77.9%
4221575 4099.1.1.52 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › FTA2 0.60 47.0 4.39e-01 82.8% 96.2%
3242625 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.60 49.0 4.52e-01 87.4% 79.1%
3587042 331.3.1.32 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3284 0.60 48.0 4.17e-01 87.4% 96.3%
4883183 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.60 50.0 4.04e-01 90.8% 90.4%
3693958 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.59 52.0 3.84e-01 97.7% 87.8%
3250567 331.18.1.4 ↗ a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.59 50.0 3.94e-01 90.8% 54.3%
3639154 331.4.1.27 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › VASt 0.59 51.0 3.93e-01 96.6% 82.9%
3935896 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 48.0 4.16e-01 87.4% 70.0%
4342449 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.58 49.0 4.38e-01 93.1% 65.8%
5053461 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 47.0 3.75e-01 88.5% 76.6%
4596504 331.10.2.1 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc 0.58 47.0 3.63e-01 87.4% 59.5%
398027 331.3.1.15 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3809 0.57 46.0 3.83e-01 86.2% 92.0%
3720665 244.1.1.18 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › FAD_binding-like 0.57 48.0 3.92e-01 89.7% 72.9%
4963976 331.6.1.1 ↗ a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain › DUF1952 0.55 44.0 4.60e-01 86.2% 97.5%
3246557 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 49.0 4.43e-01 97.7% 79.1%
3510238 6165.1.1.1 ↗ beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg 0.55 42.0 2.99e-01 80.5% 69.2%
6344 331.6.1.1 ↗ a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain › DUF1952 0.53 43.0 4.57e-01 88.5% 100.0%
3808055 244.1.1.29 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › AAA_assoc 0.52 44.0 4.00e-01 93.1% 93.3%
3689053 2484.1.1.39 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble 0.52 44.0 3.65e-01 92.0% 81.3%
4377115 5084.3.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.50 43.0 2.45e-01 97.7% 24.0%
D3 medium residues 114-178
PDB
Domain cluster: rep: polyprotein__YP_009667022__Witwatersrand_virus__1678231__D115-177
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03563.19 best Bunya_G2 86.4 2.70e-24 100.0% 23.1%
D4 medium residues 500-568
PDB
D5 medium residues 569-597_613-683
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 41.1 1.10e-10 100.0% 12.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.55 36.0 3.85e-01 98.0% 76.7%
3q1xA01 1.10.3130.10 Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 0.55 41.0 3.68e-01 79.0% 95.7%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.52 42.0 3.76e-01 90.0% 61.3%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2504456 7069.1.1.1 ↗ alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1 0.87 81.0 5.95e-01 100.0% 46.7%
2504455 7069.1.1.1 ↗ alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1 0.87 81.0 5.99e-01 100.0% 47.5%
2504457 7069.1.1.1 ↗ alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1 0.86 80.0 6.04e-01 100.0% 53.4%
3238295 109.4.1.1288 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11 0.72 38.0 2.80e-01 100.0% 21.3%
3932973 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.71 62.0 5.85e-01 96.0% 98.3%
3925646 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.69 63.0 5.67e-01 100.0% 92.6%
3225046 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.67 60.0 5.50e-01 100.0% 91.5%
3577115 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.66 59.0 5.62e-01 100.0% 99.2%
4155929 3711.1.1.28 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › NPA 0.66 59.0 5.47e-01 98.0% 97.6%
3925644 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.64 57.0 5.33e-01 100.0% 98.4%
3925649 3711.1.1.28 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › NPA 0.64 52.0 5.12e-01 89.0% 92.7%
3225038 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.61 54.0 5.08e-01 97.0% 95.8%
3630316 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.60 53.0 5.15e-01 97.0% 97.3%
3823906 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 50.0 3.69e-01 100.0% 45.0%
3945098 109.4.1.924 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH 0.52 37.0 3.64e-01 87.0% 70.5%
4034449 109.28.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › EssB extracellular domain › EssB extracellular domain › YukC 0.50 40.0 3.53e-01 86.0% 62.7%
D6 medium residues 725-795
PDB
D7 medium residues 919-985
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 78.4 5.70e-22 100.0% 7.7%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ymaA00 3.10.310.60 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.67 51.0 4.07e-01 82.1% 57.0%
4ftfA00 3.30.300.250 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.63 50.0 4.29e-01 86.6% 63.3%
3egiA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 47.0 3.45e-01 85.1% 97.4%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.61 45.0 3.50e-01 77.6% 63.1%
2as0A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.57 40.0 3.99e-01 73.1% 77.1%
8d3lA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.57 36.0 3.32e-01 76.1% 47.7%
6z9uA01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.57 36.0 3.43e-01 79.1% 51.8%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.56 42.0 3.81e-01 86.6% 59.3%
3ib5A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.56 43.0 2.83e-01 88.1% 94.4%
2yzsA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.56 36.0 3.45e-01 79.1% 55.0%
1ekjA00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.56 44.0 3.22e-01 91.0% 55.2%
2bghA02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.56 46.0 3.28e-01 92.5% 73.3%
2apoA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.56 40.0 3.48e-01 74.6% 54.5%
2nwhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 40.0 2.69e-01 79.1% 33.2%
1gskA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.55 45.0 3.57e-01 95.5% 83.8%
4esjA01 3.40.210.30 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain 0.54 44.0 3.47e-01 94.0% 52.6%
5by7A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.54 43.0 3.39e-01 88.1% 97.9%
6d6zA02 3.40.50.11440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain 0.54 43.0 3.03e-01 89.6% 86.1%
7cr6D01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.54 34.0 3.25e-01 76.1% 51.2%
3k3pA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 41.0 3.53e-01 83.6% 50.5%
1iq8A04 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.54 39.0 3.71e-01 76.1% 70.5%
7xkcA01 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.54 42.0 3.99e-01 85.1% 100.0%
6lpwB01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.54 43.0 3.25e-01 92.5% 64.2%
2k6hA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.54 42.0 3.16e-01 86.6% 44.4%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.54 42.0 4.06e-01 88.1% 77.2%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.53 33.0 3.18e-01 76.1% 51.2%
2dbsA00 3.40.1350.20 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 39.0 3.75e-01 85.1% 67.5%
1zpuA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.53 44.0 3.30e-01 100.0% 91.9%
4g0bA02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 44.0 3.12e-01 92.5% 75.5%
3sm4A00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.53 41.0 2.98e-01 89.6% 33.3%
3w0eA00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.53 40.0 4.04e-01 82.1% 100.0%
3dtnA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 41.0 3.04e-01 86.6% 81.3%
3h4rA00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.52 43.0 3.06e-01 92.5% 50.2%
5zyuA01 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.52 40.0 2.98e-01 88.1% 35.8%
3kw8A02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 41.0 3.38e-01 89.6% 93.2%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 37.0 3.07e-01 79.1% 61.5%
3lv9A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 42.0 3.38e-01 89.6% 66.2%
4bopB00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 36.0 2.88e-01 76.1% 73.3%
1ym3A00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.51 38.0 2.89e-01 86.6% 96.9%
3kzhB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 36.0 2.47e-01 80.6% 33.1%
2uxtA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.50 41.0 3.50e-01 97.0% 100.0%
5jouA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 38.0 3.30e-01 86.6% 79.3%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3742000 294.1.1.0 ↗ a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors 0.69 39.0 4.25e-01 76.1% 67.3%
2469837 3148.1.1.2 ↗ a+b two layers › putative secreted protein PA3611 › putative secreted protein PA3611 › putative secreted protein PA3611 › T2SSS_2 0.62 48.0 4.18e-01 86.6% 62.7%
4188763 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.60 46.0 4.02e-01 83.6% 79.0%
3981315 327.7.1.16 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › T6SS_TssF 0.59 48.0 3.76e-01 92.5% 47.1%
4960637 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.58 44.0 4.06e-01 83.6% 72.2%
369229 3535.1.1.1 ↗ a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS 0.58 44.0 3.71e-01 83.6% 50.0%
5080691 244.4.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit 0.57 42.0 3.68e-01 80.6% 95.4%
5067350 7518.1.1.0 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like 0.57 46.0 3.99e-01 89.6% 88.6%
4033347 11.24.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal Ig-like domain in baseplate protein ORF48 › N-terminal Ig-like domain in baseplate protein ORF48 › BppU_N 0.56 47.0 3.92e-01 98.5% 83.1%
3980839 2008.1.1.77 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C 0.56 45.0 3.56e-01 92.5% 86.3%
3193798 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 41.0 2.58e-01 82.1% 13.8%
4486660 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.56 44.0 3.70e-01 88.1% 66.7%
3287422 323.1.1.11 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › PapA_C 0.56 44.0 3.06e-01 89.6% 84.5%
162835 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.56 40.0 2.69e-01 79.1% 33.2%
3961432 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.55 37.0 2.93e-01 83.6% 31.0%
4888734 11.24.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal Ig-like domain in baseplate protein ORF48 › N-terminal Ig-like domain in baseplate protein ORF48 › BppU_N 0.55 46.0 3.84e-01 98.5% 84.1%
3325372 3156.1.1.1 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 0.55 42.0 3.72e-01 85.1% 96.0%
3649047 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.54 41.0 2.60e-01 85.1% 36.7%
3731314 3156.1.1.8 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2 0.54 45.0 3.25e-01 100.0% 80.9%
3404504 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.54 42.0 2.69e-01 86.6% 30.7%
4976672 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.54 38.0 3.81e-01 74.6% 71.4%
3892927 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.54 39.0 2.54e-01 79.1% 29.1%
3700430 2004.5.1.3 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.54 40.0 2.72e-01 80.6% 37.1%
3395104 2008.2.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like 0.54 41.0 3.26e-01 83.6% 50.0%
5011673 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 41.0 3.52e-01 85.1% 79.1%
3500632 1.1.7.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Orn_DAP_Arg_deC 0.53 39.0 3.20e-01 79.1% 41.5%
4283253 327.11.1.14 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › PF27311 0.53 40.0 3.42e-01 83.6% 52.5%
3960491 4011.1.1.0 ↗ beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins 0.53 40.0 3.99e-01 82.1% 78.6%
3618101 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.53 42.0 3.36e-01 89.6% 89.7%
4932437 1.1.9.14 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 0.53 42.0 3.89e-01 86.6% 71.8%
3415010 101.1.2.712 ↗ alpha arrays › HTH › HTH › winged helix domain › FNIP_C 0.53 39.0 2.66e-01 82.1% 36.3%
1005023 294.1.1.2 ↗ a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 0.52 40.0 3.99e-01 82.1% 98.5%
4021915 323.1.1.7 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase 0.52 43.0 3.05e-01 92.5% 84.3%
3960342 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.52 39.0 3.02e-01 85.1% 32.6%
3953271 323.1.1.9 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › WS_DGAT_cat,WS_DGAT_C 0.52 39.0 2.73e-01 86.6% 77.0%
3957140 323.1.1.15 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › WS_DGAT_C 0.52 39.0 3.03e-01 85.1% 33.5%
3513072 323.1.1.6 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf 0.51 38.0 2.85e-01 86.6% 28.2%
3783109 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.51 40.0 2.83e-01 91.0% 73.8%
3972532 294.1.1.2 ↗ a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 0.51 40.0 4.07e-01 83.6% 100.0%
3962161 4011.1.1.5 ↗ beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › Condensation 0.51 41.0 3.31e-01 88.1% 46.2%
3517316 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 38.0 3.27e-01 80.6% 75.5%
3371305 323.1.1.7 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase 0.51 41.0 3.07e-01 91.0% 83.9%
4512437 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.51 39.0 2.74e-01 89.6% 47.8%
3482005 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.39e-01 97.0% 82.9%
4158659 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.51 39.0 2.72e-01 89.6% 47.4%
3978189 221.1.2.17 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › DUF1062 0.50 36.0 3.34e-01 79.1% 98.9%
4941378 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 41.0 3.73e-01 94.0% 90.5%
D8 medium residues 986-1067_1111-1185
PDB
Domain cluster: rep: polyprotein__YP_009507882__Kairi_virus__80939__D1016-1096_1138-1232
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 156.9 1.10e-45 52.9% 9.3%
PF03557.22 Bunya_G1 136.0 2.20e-39 49.7% 8.9%