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polyprotein

Euk-Vir

Umbre_virus

polyprotein__YP_009664558__Umbre_virus__552554

Identity

Accession:
YP_009664558 ↗
Protein ID:
polyprotein
Kingdom:
euk

Quality

79.3 mean pLDDT

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 727-830
PDB
Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 67.9 8.30e-19 100.0% 11.7%
D2 high residues 836-907
PDB
Domain cluster: rep: polyprotein__YP_008400137__Brazoran_virus__1368616__D843-910
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 44.1 1.30e-11 100.0% 8.3%
D3 medium residues 371-427
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ka1A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.52 36.0 2.44e-01 73.7% 37.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3497542 626.1.1.1 ↗ alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 0.61 44.0 2.67e-01 77.2% 14.1%
3410018 603.1.1.104 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.53 44.0 2.68e-01 93.0% 39.2%
D4 medium residues 492-581
PDB
Domain cluster: rep: polyprotein__YP_010084299__California_encephalitis_virus__35305__D489-574
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 38.3 7.60e-10 77.8% 7.8%
D5 medium residues 952-1019_1097-1141_1215-1252
PDB
Domain cluster: rep: glycoprotein_precursor__YP_009362035__Kibale_virus__1406344__D349-405_490-561_609-646
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 85.3 4.80e-24 45.7% 7.9%
PF03557.22 Bunya_G1 46.1 3.30e-12 32.5% 5.4%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rerA01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.78 59.0 6.41e-01 86.8% 93.7%
4hj1A01 2.60.98.50 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › 0.74 67.0 6.54e-01 98.0% 98.8%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 36.0 3.95e-01 93.4% 71.7%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 37.0 3.89e-01 94.0% 72.6%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.56 36.0 4.08e-01 95.4% 85.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 26.0 3.62e-01 74.2% 98.4%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 34.0 3.56e-01 93.4% 67.2%
3l81A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.53 31.0 3.58e-01 94.0% 79.1%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.53 32.0 3.43e-01 96.7% 68.5%
5joeA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 29.0 3.68e-01 95.4% 91.3%
1x44A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 30.0 3.49e-01 96.0% 81.6%
3mnmA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.52 33.0 3.86e-01 76.8% 88.4%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.52 28.0 3.60e-01 94.7% 97.5%
2o30A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 27.0 3.50e-01 96.0% 92.7%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.51 19.0 2.68e-01 72.8% 69.2%
2cqvA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 24.0 2.73e-01 94.0% 54.4%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 29.0 3.39e-01 94.7% 80.0%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3593249 7055.1.1.0 ↗ beta complex topology › Domain II of HAP2 › Domain II of HAP2 › Domain II of HAP2 0.74 66.0 4.81e-01 95.4% 99.0%
3056811 5090.1.1.2 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Hanta_Gc_N 0.74 65.0 5.05e-01 94.7% 95.6%
5014673 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 36.0 4.64e-01 78.1% 97.5%
5028250 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.65 44.0 5.20e-01 94.7% 100.0%
5028249 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.61 45.0 5.05e-01 92.1% 99.1%
5030457 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.58 40.0 4.59e-01 76.2% 96.4%
4201878 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.57 25.0 3.65e-01 73.5% 93.8%
4441621 3943.1.1.3 ↗ beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › flgK_1st_1 0.55 26.0 3.18e-01 81.5% 67.8%
441034 3386.1.1.4 ↗ beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C 0.55 36.0 4.00e-01 96.0% 83.3%
3405687 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 26.0 3.10e-01 94.7% 65.3%
3974145 3943.1.1.0 ↗ beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains 0.54 27.0 3.13e-01 89.4% 64.1%
3284501 11.1.3.8 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › RskA_C 0.54 27.0 3.20e-01 93.4% 67.0%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.54 25.0 3.50e-01 74.8% 96.9%
4927137 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.54 26.0 3.16e-01 97.4% 67.4%
4995368 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.53 27.0 2.91e-01 96.7% 51.1%
3576695 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 25.0 2.98e-01 93.4% 64.2%
3514135 5084.1.1.19 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › BCSC_C 0.51 33.0 3.26e-01 88.7% 60.0%
1271490 12.2.1.1 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C 0.50 29.0 3.28e-01 95.4% 73.9%
4954877 11.1.1.531 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.50 29.0 3.35e-01 94.0% 78.2%
D6 medium residues 1020-1096_1142-1214
PDB
Domain cluster: rep: polyprotein__YP_009507882__Kairi_virus__80939__D1016-1096_1138-1232
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03557.22 best Bunya_G1 159.7 1.50e-46 52.7% 8.9%
PF03557.22 Bunya_G1 122.8 2.20e-35 51.3% 8.7%