←Back to structures

polyprotein

Euk-Vir

Lumbo_virus

polyprotein__YP_009666965__Lumbo_virus__80940

Identity

Accession:: YP_009666965 ↗
Protein ID:: polyprotein
Kingdom:: euk

Quality

79.0 mean pLDDT

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-173

PDB

Domain cluster: rep: polyprotein__YP_009667022__Witwatersrand_virus__1678231__D115-177

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	91.7	6.70e-26	100.0%	23.8%

D2 high residues 747-834

PDB

Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	59.8	2.30e-16	100.0%	9.9%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1a5iA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.60	37.0	3.42e-01	94.3%	45.8%
1zvfB01	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.60	34.0	2.75e-01	97.7%	28.7%
1fiwA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.58	36.0	3.28e-01	93.2%	44.2%
2p1gA02	2.30.260.10	Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain	0.53	38.0	3.72e-01	92.0%	67.0%
4h4nA00	2.60.40.3750	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.52	32.0	3.59e-01	97.7%	83.9%
2qdeA01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.51	43.0	3.77e-01	94.3%	98.5%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3453971	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.61	37.0	3.44e-01	93.2%	47.0%
3325410	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.54	35.0	3.18e-01	94.3%	47.5%
3438010	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.54	35.0	3.21e-01	94.3%	48.3%
5039895	10.1.2.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED)	0.52	40.0	3.65e-01	92.0%	61.7%
4865058	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.51	37.0	3.58e-01	98.9%	67.0%

D3 high residues 838-910

PDB

Domain cluster: rep: polyprotein__YP_008709777__Murrumbidgee_virus__1406134__D787-850

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	72.0	4.80e-20	100.0%	8.3%

D4 medium residues 23-86

PDB

Domain cluster: rep: Glycoprotein_precursor__YP_010086209__Caimito_virus__2572766__D29-112

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	56.1	4.60e-15	100.0%	21.7%

D5 medium residues 205-326

PDB

Domain cluster: rep: polyprotein__YP_009666976__San_Angelo_virus__45767__D199-326

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	149.3	1.90e-43	77.9%	33.8%

D6 medium residues 358-427_440-465

PDB

Domain cluster: rep: polyprotein__YP_009666942__Enseada_virus__1821545__D351-432_453-478

D7 medium residues 551-719

PDB

Domain cluster: rep: M_polyprotein__YP_009666885__Jamestown_Canyon_virus__35511__D547-717

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	128.6	3.90e-37	97.6%	18.4%

D8 medium residues 1055-1089_1182-1215

PDB

Domain cluster: rep: polyprotein,_partial__YP_009512922__Tete_orthobunyavirus__35319__D1042-1078_1185-1197

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	74.2	1.10e-20	55.1%	4.2%
PF03557.22	Bunya_G1	58.4	6.40e-16	49.3%	3.9%

D9 medium residues 1255-1347

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009664619__Gouleako_virus__603003__D815-896

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	93.7	1.40e-26	100.0%	10.5%

D10 medium residues 1389-1440

PDB

Domain cluster: representative