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polyprotein

Euk-Vir

Salehabad_virus

polyprotein__YP_010086061__Salehabad_virus__904699

Identity

Accession:: YP_010086061 ↗
Protein ID:: polyprotein
Kingdom:: euk

Quality

76.9 mean pLDDT

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-132

PDB

Domain cluster: rep: polyprotein__YP_009346022__Tapara_virus__1926501__D16-129

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07246.16 best	Phlebovirus_NSM	43.3	4.40e-11	100.0%	41.7%

D2 high residues 1160-1284

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009666331__Mukawa_virus__1569922__D875-994

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19019.7 best	Phlebo_G2_C	150.5	5.20e-44	92.8%	67.2%

D3 medium residues 298-442

PDB

Domain cluster: rep: Glycoproteins_G1_and_G2_precursor__YP_089671__Sandfly_fever_Naples_virus__206160__D318-463

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07243.17 best	Phlebovirus_G1	107.0	1.30e-30	100.0%	24.5%

D4 medium residues 615-702

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009304994__Wenzhou_Shrimp_Virus_1__1608095__D240-325

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07243.17 best	Phlebovirus_G1	114.1	8.50e-33	100.0%	16.5%

D5 medium residues 703-728_1285-1337

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07243.17 best	Phlebovirus_G1	33.1	3.10e-08	98.7%	11.6%
PF19019.7	Phlebo_G2_C	55.1	1.10e-14	86.1%	31.6%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ahmG01	6.10.250.2820	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.76	56.0	5.19e-01	77.2%	66.7%
1jkvA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.65	49.0	3.57e-01	78.5%	88.8%
8ctsB01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.63	45.0	4.42e-01	75.9%	80.5%
3rimB01	3.40.50.970	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains	0.56	49.0	3.25e-01	100.0%	96.0%
3thxB03	1.10.1420.10	Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 ›	0.52	41.0	3.14e-01	86.1%	56.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3997708	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.62	46.0	3.91e-01	78.5%	97.0%
4506271	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.62	53.0	4.26e-01	91.1%	71.7%
3773683	109.4.1.1393 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26715	0.50	37.0	2.93e-01	79.7%	38.3%
3560657	601.1.1.59 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › HEAT_GCN1_2	0.50	37.0	2.93e-01	79.7%	38.3%

D6 medium residues 875-898_1003-1043_1135-1154

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1pfoA02	3.30.1040.20	Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A ›	0.54	29.0	3.52e-01	76.5%	83.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3510112	391.1.2.9 ↗	few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2	0.55	35.0	4.12e-01	83.5%	91.7%
3827633	319.1.1.1 ↗	beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20	0.50	42.0	3.78e-01	97.6%	92.3%

D7 medium residues 899-984_1100-1110

PDB

Domain cluster: rep: M_protein__YP_009512940__Punta_Toro_virus__11587__D880-962_1071-1085

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07245.17 best	Phlebovirus_G2	66.5	2.90e-18	99.0%	25.4%