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pre1_saliva_scaffold_3_prodigal-single.1__X__X__00192
Bact-Virpre1_saliva_scaffold_3_prodigal-single.1__X__X__00192
Identity
- Kingdom:
- phage
Quality
55.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 83-127
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5eyaF00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 47.0 | 3.98e-01 | 71.1% | 43.4% |
| 3hp7A01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.58 | 40.0 | 3.61e-01 | 97.8% | 50.8% |
| 4qf3A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 39.0 | 3.67e-01 | 75.6% | 61.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3512726 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 35.0 | 3.35e-01 | 71.1% | 50.9% |
| 3784963 | 377.13.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › Primase zinc finger › Primase zinc finger › zf-primase | 0.56 | 38.0 | 4.19e-01 | 73.3% | 100.0% |