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pre1_saliva_scaffold_4_prodigal-single.1__X__X__00076
Bact-Virpre1_saliva_scaffold_4_prodigal-single.1__X__X__00076
Identity
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-108
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fp1B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.63 | 47.0 | 3.56e-01 | 85.2% | 36.6% |
| 1hr7C02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 42.0 | 2.93e-01 | 100.0% | 40.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3727415 | 11.1.4.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Dioxygenase_C,Dioxygenase_N | 0.73 | 49.0 | 3.13e-01 | 77.0% | 14.6% |
| 3698312 | 11.1.4.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Dioxygenase_C,Dioxygenase_N | 0.71 | 51.0 | 3.24e-01 | 82.0% | 15.3% |
| 3816625 | 605.3.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Nonstructural protein ns2, Nep, M1-binding domain › Nonstructural protein ns2, Nep, M1-binding domain | 0.70 | 47.0 | 4.40e-01 | 70.5% | 61.3% |
| 3595946 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.67 | 46.0 | 4.55e-01 | 73.8% | 67.7% |
| 3507551 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.65 | 46.0 | 4.00e-01 | 75.4% | 61.1% |
| 4016151 | 2003.1.3.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like | 0.60 | 43.0 | 2.78e-01 | 77.0% | 48.8% |
| 3244254 | 101.1.8.23 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF4473 | 0.53 | 38.0 | 3.51e-01 | 72.1% | 55.0% |