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pre1_saliva_scaffold_4_prodigal-single.1__X__X__00164
Bact-Virpre1_saliva_scaffold_4_prodigal-single.1__X__X__00164
Identity
- Kingdom:
- phage
Quality
78.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-130
Domain cluster:
representative
D2
medium
residues 132-218
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zxiA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.61 | 40.0 | 3.94e-01 | 100.0% | 60.8% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 30.0 | 3.21e-01 | 79.3% | 52.7% |
| 2ebqA00 | 4.10.1060.10 | Few Secondary Structures › Irregular › ZNF265 like › Zinc finger, RanBP2-type | 0.52 | 26.0 | 3.19e-01 | 75.9% | 80.9% |
| 3l4gB02 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.51 | 44.0 | 3.40e-01 | 97.7% | 66.2% |
| 2cxiA02 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.50 | 42.0 | 3.35e-01 | 97.7% | 67.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3725941 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 27.0 | 3.49e-01 | 72.4% | 66.0% |
| 4171727 | 3265.1.1.0 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA | 0.64 | 44.0 | 4.87e-01 | 100.0% | 90.0% |
| 4024190 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 31.0 | 3.97e-01 | 73.6% | 100.0% |
| 3172396 | 2002.1.1.192 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase | 0.56 | 47.0 | 2.85e-01 | 95.4% | 75.0% |
| 3981625 | 2004.1.1.549 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 | 0.55 | 47.0 | 2.75e-01 | 97.7% | 24.3% |
| 3594464 | 398.1.1.0 ↗ | few secondary structure elements › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers | 0.53 | 24.0 | 3.35e-01 | 71.3% | 100.0% |
| 3489384 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 39.0 | 3.00e-01 | 80.5% | 53.5% |
| 3192730 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.52 | 40.0 | 3.39e-01 | 83.9% | 63.9% |
| 4480958 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 23.0 | 3.17e-01 | 72.4% | 86.4% |
D3
medium
residues 318-340_395-440
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zc1A01 | 2.40.40.50 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain | 0.75 | 68.0 | 5.93e-01 | 100.0% | 86.4% |
| 1twfA03 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.75 | 68.0 | 5.97e-01 | 100.0% | 74.3% |
| 1ynjD04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.74 | 67.0 | 5.22e-01 | 100.0% | 81.4% |
| 1qcsA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.72 | 64.0 | 6.11e-01 | 100.0% | 91.5% |
| 7eu1A01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.72 | 64.0 | 5.06e-01 | 100.0% | 68.3% |
| 1cr5A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.72 | 64.0 | 6.24e-01 | 98.6% | 90.9% |
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.71 | 65.0 | 5.77e-01 | 100.0% | 79.2% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.71 | 63.0 | 5.70e-01 | 100.0% | 91.5% |
| 3m3gA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.71 | 61.0 | 5.05e-01 | 95.7% | 87.5% |
| 1n10A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.68 | 60.0 | 5.09e-01 | 100.0% | 93.0% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.65 | 56.0 | 5.34e-01 | 100.0% | 88.1% |
| 2napA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 55.0 | 4.68e-01 | 95.7% | 93.0% |
| 7nz1G01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 55.0 | 4.93e-01 | 94.2% | 92.7% |
| 2ae0X01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.61 | 52.0 | 3.95e-01 | 100.0% | 55.0% |
| 2fivA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.53 | 44.0 | 3.80e-01 | 94.2% | 81.4% |
| 1yg9A03 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.53 | 42.0 | 3.65e-01 | 91.3% | 87.2% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954178 | 1.1.2.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat | 0.81 | 74.0 | 4.41e-01 | 100.0% | 29.5% |
| 5030460 | 1.1.2.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat | 0.81 | 74.0 | 4.36e-01 | 100.0% | 28.0% |
| 4961166 | 1.1.2.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat | 0.80 | 74.0 | 4.93e-01 | 100.0% | 55.9% |
| 3374701 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.77 | 70.0 | 5.07e-01 | 100.0% | 73.3% |
| 3509068 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.76 | 69.0 | 4.87e-01 | 100.0% | 76.0% |
| 4556003 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.76 | 69.0 | 6.45e-01 | 100.0% | 85.5% |
| 3748306 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 68.0 | 6.04e-01 | 98.6% | 89.5% |
| 4015760 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 68.0 | 4.86e-01 | 100.0% | 78.5% |
| 3360997 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.75 | 68.0 | 5.29e-01 | 100.0% | 66.9% |
| 3836120 | 275.1.1.1 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 | 0.75 | 68.0 | 4.85e-01 | 100.0% | 81.0% |
| 3698542 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.75 | 67.0 | 4.76e-01 | 100.0% | 75.6% |
| 3406944 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 66.0 | 5.26e-01 | 100.0% | 65.7% |
| 4097451 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.74 | 68.0 | 6.32e-01 | 100.0% | 92.9% |
| 4954799 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.74 | 67.0 | 6.01e-01 | 100.0% | 84.2% |
| 3486347 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 67.0 | 6.00e-01 | 100.0% | 80.0% |
| 4607187 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 67.0 | 5.98e-01 | 100.0% | 82.1% |
| 3273202 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 66.0 | 5.81e-01 | 100.0% | 86.0% |
| 3343851 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 66.0 | 4.59e-01 | 100.0% | 42.0% |
| 5037727 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 65.0 | 6.02e-01 | 97.1% | 88.2% |
| 5001485 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.72 | 64.0 | 5.97e-01 | 97.1% | 88.2% |
| 3706161 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 65.0 | 6.04e-01 | 98.6% | 87.1% |
| 3409396 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.72 | 65.0 | 5.64e-01 | 100.0% | 72.4% |
| 5006472 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 60.0 | 5.74e-01 | 91.3% | 92.5% |
| 3824979 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 65.0 | 5.94e-01 | 100.0% | 86.7% |
| 5078528 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 65.0 | 5.36e-01 | 100.0% | 89.2% |
| 3492328 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 62.0 | 5.94e-01 | 97.1% | 90.0% |
| 3828556 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 62.0 | 4.93e-01 | 97.1% | 67.1% |
| 4027677 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 64.0 | 5.98e-01 | 100.0% | 91.8% |
| 3707799 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 65.0 | 6.01e-01 | 100.0% | 87.1% |
| 3514644 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.71 | 61.0 | 5.68e-01 | 100.0% | 87.8% |
| 3599535 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 65.0 | 5.87e-01 | 100.0% | 91.1% |
| 4415829 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 62.0 | 5.52e-01 | 100.0% | 95.0% |
| 4412522 | 1.1.2.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin | 0.70 | 62.0 | 4.86e-01 | 100.0% | 74.3% |
| 3456064 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.70 | 61.0 | 4.87e-01 | 100.0% | 77.2% |
| 4241168 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 62.0 | 5.91e-01 | 97.1% | 92.5% |
| 5048468 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 60.0 | 5.86e-01 | 95.7% | 86.7% |
| 4014411 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 61.0 | 5.53e-01 | 100.0% | 88.4% |
| 5045002 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 61.0 | 5.57e-01 | 97.1% | 82.2% |
| 4446061 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 58.0 | 5.60e-01 | 94.2% | 90.0% |
| 4024752 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 61.0 | 5.40e-01 | 100.0% | 77.0% |
| 4500954 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 56.0 | 5.51e-01 | 98.6% | 84.0% |
| 4203264 | 1.1.2.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › N1_PEX6 | 0.68 | 60.0 | 5.42e-01 | 98.6% | 91.6% |
| 4586145 | 1.1.2.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin | 0.68 | 53.0 | 4.67e-01 | 84.1% | 85.0% |
| 5008491 | 1.1.2.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF27352 | 0.68 | 60.0 | 5.31e-01 | 100.0% | 90.0% |
| 4354975 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 61.0 | 4.63e-01 | 100.0% | 49.4% |
| 4270657 | 1.1.2.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › N1_PEX6 | 0.67 | 60.0 | 5.50e-01 | 100.0% | 91.1% |
| 4863286 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.67 | 58.0 | 5.47e-01 | 98.6% | 87.2% |
| 3740728 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.67 | 57.0 | 5.43e-01 | 98.6% | 89.4% |
| 33 | 1.1.2.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PEX-2N | 0.65 | 56.0 | 5.34e-01 | 100.0% | 88.1% |
| 4977837 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.65 | 56.0 | 5.25e-01 | 98.6% | 88.2% |
| 3343849 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 54.0 | 4.93e-01 | 97.1% | 87.4% |
| 4934824 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 55.0 | 5.19e-01 | 100.0% | 89.4% |
| 4116299 | 1.1.2.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › N1_PEX6 | 0.64 | 56.0 | 5.05e-01 | 100.0% | 89.5% |
| 4983823 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.63 | 55.0 | 4.44e-01 | 100.0% | 88.4% |
| 4955491 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.62 | 53.0 | 4.38e-01 | 100.0% | 88.9% |
| 3401645 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.60 | 50.0 | 3.16e-01 | 92.8% | 33.1% |
| 3446052 | 1.1.2.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › KWL1 | 0.57 | 47.0 | 3.72e-01 | 94.2% | 64.9% |
| 3691213 | 1.1.2.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP | 0.57 | 48.0 | 4.26e-01 | 97.1% | 85.7% |
| 3297285 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.56 | 48.0 | 4.19e-01 | 100.0% | 79.1% |
| 4492004 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.56 | 48.0 | 4.01e-01 | 100.0% | 80.5% |
| 3930502 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.56 | 48.0 | 4.20e-01 | 100.0% | 90.0% |
| 3394971 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.56 | 47.0 | 3.74e-01 | 100.0% | 83.7% |
| 3362676 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.55 | 46.0 | 3.81e-01 | 100.0% | 84.3% |
| 2543743 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.55 | 46.0 | 4.06e-01 | 95.7% | 78.3% |
| 3461051 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.55 | 46.0 | 3.91e-01 | 98.6% | 90.4% |
| 5009916 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.55 | 46.0 | 4.16e-01 | 100.0% | 87.6% |
| 3312578 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.55 | 45.0 | 3.82e-01 | 100.0% | 83.6% |
| 5031732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.54 | 46.0 | 3.96e-01 | 98.6% | 80.9% |
| 3355666 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.54 | 44.0 | 2.87e-01 | 100.0% | 41.1% |
D4
medium
residues 341-394
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7n1nB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 56.0 | 5.40e-01 | 94.4% | 87.3% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 56.0 | 5.50e-01 | 98.1% | 86.7% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 54.0 | 4.83e-01 | 94.4% | 67.9% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 54.0 | 5.22e-01 | 100.0% | 93.8% |
| 3b7hA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 51.0 | 4.69e-01 | 92.6% | 72.4% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 50.0 | 4.75e-01 | 92.6% | 77.1% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 54.0 | 4.90e-01 | 98.1% | 76.0% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 50.0 | 4.37e-01 | 92.6% | 65.2% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 52.0 | 3.92e-01 | 100.0% | 46.0% |
| 4jbeB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.62 | 46.0 | 3.02e-01 | 83.3% | 52.2% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 49.0 | 4.62e-01 | 94.4% | 79.7% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 49.0 | 3.73e-01 | 94.4% | 50.4% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 47.0 | 4.26e-01 | 94.4% | 64.7% |
| 5jzeA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.60 | 46.0 | 3.51e-01 | 94.4% | 46.5% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 49.0 | 4.30e-01 | 100.0% | 64.4% |
| 3by4A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.58 | 46.0 | 3.39e-01 | 94.4% | 40.1% |
| 3b0xA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.58 | 47.0 | 4.19e-01 | 98.1% | 97.7% |
| 3bm1A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 49.0 | 3.52e-01 | 100.0% | 57.1% |
| 1nt4A02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.58 | 47.0 | 3.61e-01 | 100.0% | 56.5% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.58 | 48.0 | 3.53e-01 | 92.6% | 64.1% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 38.0 | 3.15e-01 | 81.5% | 38.1% |
| 2fzlA02 | 6.10.140.1180 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 38.0 | 3.66e-01 | 72.2% | 79.0% |
| 2fjrA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 44.0 | 4.09e-01 | 100.0% | 73.7% |
| 2r1iA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 44.0 | 3.41e-01 | 94.4% | 68.5% |
| 2qgaB03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.54 | 44.0 | 4.20e-01 | 94.4% | 98.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4147763 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.68 | 57.0 | 5.33e-01 | 100.0% | 77.1% |
| 4940014 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 55.0 | 5.09e-01 | 100.0% | 88.0% |
| 4502581 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.66 | 55.0 | 5.24e-01 | 96.3% | 84.6% |
| 3164274 | 101.1.4.78 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › dnstrm_HI1420 | 0.66 | 54.0 | 4.76e-01 | 96.3% | 70.6% |
| 4869547 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.66 | 52.0 | 4.95e-01 | 92.6% | 86.6% |
| 4935348 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.65 | 54.0 | 4.91e-01 | 100.0% | 88.7% |
| 4264146 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.65 | 54.0 | 5.06e-01 | 96.3% | 80.9% |
| 3965598 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.65 | 52.0 | 4.88e-01 | 96.3% | 78.6% |
| None | — | 0.64 | 51.0 | 5.00e-01 | 96.3% | 98.3% | |
| 166410 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.64 | 51.0 | 4.69e-01 | 92.6% | 72.4% |
| None | — | 0.64 | 51.0 | 4.92e-01 | 94.4% | 84.6% | |
| 2157747 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.64 | 52.0 | 4.91e-01 | 96.3% | 79.1% |
| 169605 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.64 | 53.0 | 4.69e-01 | 100.0% | 63.5% |
| 4033847 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.63 | 50.0 | 4.18e-01 | 92.6% | 51.4% |
| 5003294 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.63 | 50.0 | 4.59e-01 | 92.6% | 72.0% |
| 3988311 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.63 | 50.0 | 4.63e-01 | 94.4% | 72.0% |
| 4605318 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.63 | 51.0 | 4.69e-01 | 96.3% | 77.3% |
| 5046258 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.63 | 52.0 | 4.77e-01 | 98.1% | 72.0% |
| 4982971 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 50.0 | 4.52e-01 | 94.4% | 70.0% |
| 3987836 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 51.0 | 4.78e-01 | 96.3% | 78.6% |
| 3164312 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 52.0 | 4.68e-01 | 100.0% | 67.5% |
| 4589522 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 49.0 | 4.38e-01 | 94.4% | 80.0% |
| 3944738 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 50.0 | 4.59e-01 | 96.3% | 77.3% |
| 2392399 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.61 | 50.0 | 4.68e-01 | 94.4% | 74.6% |
| 3508650 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.61 | 49.0 | 4.70e-01 | 96.3% | 84.6% |
| 3587838 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.61 | 48.0 | 4.58e-01 | 96.3% | 80.0% |
| 5028787 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.61 | 46.0 | 4.36e-01 | 94.4% | 72.0% |
| 3990067 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.60 | 48.0 | 4.35e-01 | 94.4% | 68.8% |
| 4952630 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.60 | 48.0 | 4.42e-01 | 92.6% | 72.0% |
| 2141639 | 198.1.1.6 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › Saposin | 0.60 | 45.0 | 3.63e-01 | 85.2% | 51.7% |
| 334005 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.58 | 48.0 | 3.55e-01 | 100.0% | 57.2% |
| 4951200 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.58 | 47.0 | 4.22e-01 | 98.1% | 97.6% |
| 3989217 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.58 | 45.0 | 4.41e-01 | 96.3% | 86.2% |
| 3988789 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.57 | 45.0 | 4.23e-01 | 96.3% | 73.3% |
| 5014742 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.56 | 37.0 | 2.82e-01 | 70.4% | 83.2% |
| 4033987 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.55 | 44.0 | 4.08e-01 | 100.0% | 100.0% |
| 3428408 | 632.2.1.30 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › Auxin_canalis | 0.54 | 46.0 | 4.18e-01 | 96.3% | 72.0% |
| 3712438 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 41.0 | 3.25e-01 | 100.0% | 96.6% |