pre3_saliva_scaffold_18_prodigal-single.1XX__00073

Bact-Vir

pre3_saliva_scaffold_18_prodigal-single.1__X__X__00073

Identity

81.2 mean pLDDT

View cluster (6 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-156

PDB

Domain cluster: rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388__D99-198_300-332

D2 high residues 160-297

PDB

Domain cluster: rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00035__D149-265

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	41.8	1.40e-10	99.3%	60.9%

D3 high residues 363-629

PDB

Domain cluster: rep: ORF42__YP_656697__Ranid_herpesvirus_1__85655__D427-594_663-741

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3c6aA00	3.30.420.240	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 ›	0.88	60.0	7.02e-01	97.4%	92.4%
5m1pB00	3.30.420.240	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 ›	0.85	55.0	6.52e-01	92.5%	91.0%
6ro0D00	2.40.50.110	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.52	21.0	3.15e-01	88.4%	85.5%
6rupA00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.51	21.0	3.09e-01	82.8%	85.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1311096	2484.1.1.28 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pack_C	0.67	51.0	5.57e-01	92.1%	93.6%
5021935	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.50	37.0	3.44e-01	76.0%	84.9%
3494266	331.4.1.5 ↗	a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1_BRSK	0.50	19.0	2.71e-01	84.3%	70.8%

D4 medium residues 630-679

PDB