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pre3_saliva_scaffold_18_prodigal-single.1__X__X__00135
Bact-Virpre3_saliva_scaffold_18_prodigal-single.1__X__X__00135
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-82
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00156__D14-64
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5bxyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.85 | 56.0 | 4.24e-01 | 100.0% | 30.5% |
| 3k0bA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.83 | 62.0 | 4.52e-01 | 100.0% | 30.9% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.83 | 54.0 | 3.90e-01 | 100.0% | 25.4% |
| 3mb5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.81 | 56.0 | 3.96e-01 | 100.0% | 25.4% |
| 3bkxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.81 | 55.0 | 3.59e-01 | 98.6% | 17.9% |
| 6aieA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.76 | 52.0 | 3.78e-01 | 100.0% | 26.9% |
| 4kdcA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 50.0 | 3.51e-01 | 98.6% | 23.0% |
| 1nytA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.69 | 45.0 | 3.52e-01 | 95.7% | 32.2% |
| 4rxuA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 45.0 | 3.35e-01 | 100.0% | 27.5% |
| 2g19A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.62 | 45.0 | 3.20e-01 | 78.3% | 92.1% |
| 1gq2A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 50.0 | 3.31e-01 | 92.8% | 22.3% |
| 1zjcA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.60 | 44.0 | 3.34e-01 | 100.0% | 31.1% |
| 1wznA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 44.0 | 3.20e-01 | 100.0% | 28.7% |
| 6smoB02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 45.0 | 3.65e-01 | 100.0% | 43.2% |
| 4k28A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 38.0 | 3.08e-01 | 91.3% | 33.3% |
| 1lwdA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.56 | 48.0 | 3.00e-01 | 100.0% | 16.7% |
| 4iilA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 3.29e-01 | 87.0% | 53.7% |
| 3ahcA02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.55 | 43.0 | 3.18e-01 | 91.3% | 57.3% |
| 3uugA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 47.0 | 3.55e-01 | 100.0% | 53.6% |
| 2vy9A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.54 | 45.0 | 3.96e-01 | 98.6% | 77.2% |
| 8dq6A01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.54 | 43.0 | 3.85e-01 | 89.9% | 72.0% |
| 3oa3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 44.0 | 3.08e-01 | 97.1% | 43.5% |
| 6gvdA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 44.0 | 2.97e-01 | 100.0% | 40.9% |
| 2dbdA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 39.0 | 3.44e-01 | 79.7% | 58.9% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946596 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.95 | 90.0 | 5.58e-01 | 100.0% | 21.9% |
| 4997131 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.93 | 85.0 | 5.36e-01 | 97.1% | 24.4% |
| 4970786 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.90 | 81.0 | 5.04e-01 | 100.0% | 20.3% |
| 4976856 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.89 | 80.0 | 5.08e-01 | 100.0% | 22.8% |
| 4336036 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.85 | 79.0 | 4.90e-01 | 100.0% | 21.4% |
| 5024598 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.84 | 78.0 | 5.85e-01 | 100.0% | 54.8% |
| 3981664 | 2003.1.5.160 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase, Eco57I | 0.84 | 78.0 | 4.67e-01 | 100.0% | 25.4% |
| 4155768 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.84 | 78.0 | 4.80e-01 | 100.0% | 30.4% |
| None | — | 0.84 | 77.0 | 4.81e-01 | 100.0% | 31.8% | |
| 4580141 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.84 | 77.0 | 5.14e-01 | 100.0% | 28.9% |
| 3838101 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.82 | 75.0 | 4.82e-01 | 100.0% | 23.8% |
| 4944007 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.78 | 70.0 | 4.44e-01 | 100.0% | 26.3% |
| 5075605 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.73 | 51.0 | 3.41e-01 | 100.0% | 19.6% |
| 4417887 | 2003.1.1.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH | 0.72 | 49.0 | 3.76e-01 | 94.2% | 31.6% |
| 5058129 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.68 | 47.0 | 3.26e-01 | 100.0% | 22.2% |
| 3732882 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.67 | 48.0 | 3.26e-01 | 100.0% | 20.4% |
| 3599308 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.67 | 60.0 | 4.03e-01 | 100.0% | 27.8% |
| 4991721 | 2003.1.1.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › OCD_Mu_crystall | 0.66 | 45.0 | 3.33e-01 | 95.7% | 27.0% |
| 3589216 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.64 | 45.0 | 3.10e-01 | 100.0% | 20.8% |
| 3177371 | 2003.1.5.47 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT5 | 0.62 | 55.0 | 4.02e-01 | 100.0% | 36.8% |
| 4182699 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.58 | 43.0 | 2.99e-01 | 100.0% | 22.8% |
| 3740349 | 2003.1.1.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Malic_M | 0.58 | 48.0 | 3.56e-01 | 95.7% | 62.1% |
| None | — | 0.57 | 48.0 | 3.31e-01 | 95.7% | 46.8% | |
| 3353868 | 2003.1.5.111 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Rsm22 | 0.55 | 42.0 | 3.45e-01 | 100.0% | 42.9% |
| 4018654 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.54 | 48.0 | 3.33e-01 | 100.0% | 40.9% |
| 5049158 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.52 | 45.0 | 3.42e-01 | 100.0% | 80.0% |